Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDNQ99608 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NDNQ99608 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDNQ99608 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.7■□□□□ 0.26
NDNQ99608 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDNQ99608 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDNQ99608 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.7■□□□□ 0.26
NDNQ99608 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.7■□□□□ 0.26
NDNQ99608 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDNQ99608 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDNQ99608 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDNQ99608 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDNQ99608 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDNQ99608 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDNQ99608 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDNQ99608 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.69■□□□□ 0.26
NDNQ99608 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDNQ99608 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDNQ99608 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDNQ99608 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDNQ99608 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDNQ99608 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDNQ99608 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
NDNQ99608 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.69■□□□□ 0.26
NDNQ99608 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.69■□□□□ 0.26
NDNQ99608 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.69■□□□□ 0.26
NDNQ99608 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.69■□□□□ 0.26
NDNQ99608 FAM197Y8-203ENST00000450145 560 ntBASIC16.69■□□□□ 0.26
NDNQ99608 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.69■□□□□ 0.26
NDNQ99608 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.69■□□□□ 0.26
NDNQ99608 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.69■□□□□ 0.26
NDNQ99608 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.69■□□□□ 0.26
NDNQ99608 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.69■□□□□ 0.26
NDNQ99608 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.69■□□□□ 0.26
NDNQ99608 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.69■□□□□ 0.26
NDNQ99608 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDNQ99608 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDNQ99608 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDNQ99608 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDNQ99608 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDNQ99608 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NDNQ99608 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDNQ99608 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDNQ99608 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
NDNQ99608 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NDNQ99608 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.69■□□□□ 0.26
NDNQ99608 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDNQ99608 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.69■□□□□ 0.26
NDNQ99608 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NDNQ99608 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NDNQ99608 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.69■□□□□ 0.26
NDNQ99608 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
NDNQ99608 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NDNQ99608 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDNQ99608 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NDNQ99608 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NDNQ99608 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDNQ99608 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDNQ99608 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NDNQ99608 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDNQ99608 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDNQ99608 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
NDNQ99608 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.68■□□□□ 0.26
NDNQ99608 PMS2P1-201ENST00000431037 1228 ntBASIC16.68■□□□□ 0.26
NDNQ99608 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.68■□□□□ 0.26
NDNQ99608 AC136632.2-201ENST00000512891 861 ntBASIC16.68■□□□□ 0.26
NDNQ99608 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.68■□□□□ 0.26
NDNQ99608 AC012640.2-201ENST00000561606 901 ntBASIC16.68■□□□□ 0.26
NDNQ99608 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.68■□□□□ 0.26
NDNQ99608 AL121912.1-201ENST00000603683 238 ntBASIC16.68■□□□□ 0.26
NDNQ99608 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.68■□□□□ 0.26
NDNQ99608 AC148477.8-201ENST00000624298 468 ntBASIC16.68■□□□□ 0.26
NDNQ99608 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.68■□□□□ 0.26
NDNQ99608 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDNQ99608 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NDNQ99608 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.68■□□□□ 0.26
NDNQ99608 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NDNQ99608 SLC22A20-204ENST00000530038 1673 ntBASIC16.68■□□□□ 0.26
NDNQ99608 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NDNQ99608 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDNQ99608 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NDNQ99608 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NDNQ99608 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDNQ99608 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NDNQ99608 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
NDNQ99608 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NDNQ99608 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NDNQ99608 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NDNQ99608 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NDNQ99608 AP002414.3-201ENST00000589352 1468 ntBASIC16.67■□□□□ 0.26
NDNQ99608 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
NDNQ99608 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NDNQ99608 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NDNQ99608 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NDNQ99608 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NDNQ99608 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.67■□□□□ 0.26
NDNQ99608 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NDNQ99608 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NDNQ99608 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NDNQ99608 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms