Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF2Q99496 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
RNF2Q99496 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RNF2Q99496 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RNF2Q99496 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RNF2Q99496 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF2Q99496 AL021920.2-201ENST00000624828 1351 ntBASIC13.29□□□□□ -0.28
RNF2Q99496 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RNF2Q99496 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RNF2Q99496 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF2Q99496 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.29□□□□□ -0.28
RNF2Q99496 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RNF2Q99496 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.29□□□□□ -0.28
RNF2Q99496 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
RNF2Q99496 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 AC009336.1-201ENST00000608941 1553 ntBASIC13.28□□□□□ -0.28
RNF2Q99496 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.28□□□□□ -0.28
RNF2Q99496 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RNF2Q99496 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.28□□□□□ -0.28
RNF2Q99496 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.28□□□□□ -0.28
RNF2Q99496 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.28□□□□□ -0.28
RNF2Q99496 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RNF2Q99496 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
RNF2Q99496 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RNF2Q99496 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 AC003669.1-201ENST00000334569 611 ntBASIC13.28□□□□□ -0.28
RNF2Q99496 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.28□□□□□ -0.28
RNF2Q99496 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.28□□□□□ -0.28
RNF2Q99496 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.28□□□□□ -0.28
RNF2Q99496 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.28□□□□□ -0.28
RNF2Q99496 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.28□□□□□ -0.28
RNF2Q99496 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
RNF2Q99496 MIR5100-201ENST00000579544 119 ntBASIC13.28□□□□□ -0.28
RNF2Q99496 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.28□□□□□ -0.28
RNF2Q99496 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.28□□□□□ -0.28
RNF2Q99496 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.28□□□□□ -0.28
RNF2Q99496 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.28□□□□□ -0.28
RNF2Q99496 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.28□□□□□ -0.28
RNF2Q99496 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RNF2Q99496 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.28□□□□□ -0.28
RNF2Q99496 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
RNF2Q99496 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RNF2Q99496 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.28□□□□□ -0.28
RNF2Q99496 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RNF2Q99496 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RNF2Q99496 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
RNF2Q99496 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RNF2Q99496 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
RNF2Q99496 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
RNF2Q99496 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RNF2Q99496 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
RNF2Q99496 AC024909.3-201ENST00000611513 2257 ntBASIC13.27□□□□□ -0.28
RNF2Q99496 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RNF2Q99496 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RNF2Q99496 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RNF2Q99496 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RNF2Q99496 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
RNF2Q99496 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
RNF2Q99496 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.27□□□□□ -0.29
RNF2Q99496 NUS1P1-201ENST00000446295 882 ntBASIC13.27□□□□□ -0.29
RNF2Q99496 KRT16P4-201ENST00000453883 522 ntBASIC13.27□□□□□ -0.29
RNF2Q99496 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.27□□□□□ -0.29
RNF2Q99496 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.27□□□□□ -0.29
RNF2Q99496 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.27□□□□□ -0.29
RNF2Q99496 PRELID1P1-202ENST00000567272 903 ntBASIC13.27□□□□□ -0.29
RNF2Q99496 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.27□□□□□ -0.29
RNF2Q99496 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RNF2Q99496 AL591684.3-201ENST00000605187 298 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms