Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
RAB40CQ96S21 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40CQ96S21 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.52□□□□□ -0.25
RAB40CQ96S21 AL592071.1-201ENST00000611956 408 ntBASIC13.52□□□□□ -0.25
RAB40CQ96S21 AC124864.1-201ENST00000623408 392 ntBASIC13.52□□□□□ -0.25
RAB40CQ96S21 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.52□□□□□ -0.25
RAB40CQ96S21 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
RAB40CQ96S21 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40CQ96S21 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40CQ96S21 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40CQ96S21 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40CQ96S21 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
RAB40CQ96S21 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.52□□□□□ -0.25
RAB40CQ96S21 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.52□□□□□ -0.25
RAB40CQ96S21 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
RAB40CQ96S21 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.52□□□□□ -0.25
RAB40CQ96S21 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40CQ96S21 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40CQ96S21 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40CQ96S21 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.52□□□□□ -0.25
RAB40CQ96S21 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40CQ96S21 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
RAB40CQ96S21 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40CQ96S21 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40CQ96S21 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.52□□□□□ -0.25
RAB40CQ96S21 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.52□□□□□ -0.25
RAB40CQ96S21 AC144831.1-201ENST00000573312 2656 ntBASIC13.52□□□□□ -0.25
RAB40CQ96S21 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40CQ96S21 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40CQ96S21 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40CQ96S21 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40CQ96S21 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RAB40CQ96S21 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40CQ96S21 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RAB40CQ96S21 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RAB40CQ96S21 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB40CQ96S21 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
RAB40CQ96S21 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RAB40CQ96S21 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB40CQ96S21 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB40CQ96S21 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.51□□□□□ -0.25
RAB40CQ96S21 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB40CQ96S21 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
RAB40CQ96S21 NUS1P1-201ENST00000446295 882 ntBASIC13.51□□□□□ -0.25
RAB40CQ96S21 AC112907.2-201ENST00000448639 330 ntBASIC13.51□□□□□ -0.25
RAB40CQ96S21 KRT18P38-201ENST00000449496 1282 ntBASIC13.51□□□□□ -0.25
RAB40CQ96S21 POU5F1P6-201ENST00000466990 990 ntBASIC13.51□□□□□ -0.25
RAB40CQ96S21 VENTXP5-201ENST00000523979 775 ntBASIC13.51□□□□□ -0.25
RAB40CQ96S21 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RAB40CQ96S21 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB40CQ96S21 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.51□□□□□ -0.25
RAB40CQ96S21 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB40CQ96S21 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.51□□□□□ -0.25
RAB40CQ96S21 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RAB40CQ96S21 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40CQ96S21 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.51□□□□□ -0.25
RAB40CQ96S21 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.51□□□□□ -0.25
RAB40CQ96S21 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB40CQ96S21 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB40CQ96S21 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.51□□□□□ -0.25
RAB40CQ96S21 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.5□□□□□ -0.25
RAB40CQ96S21 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40CQ96S21 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40CQ96S21 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40CQ96S21 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RAB40CQ96S21 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40CQ96S21 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.5□□□□□ -0.25
RAB40CQ96S21 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40CQ96S21 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40CQ96S21 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms