Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC85AQ96PX6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.52■□□□□ 0.87
CCDC85AQ96PX6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC20.52■□□□□ 0.87
CCDC85AQ96PX6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.52■□□□□ 0.87
CCDC85AQ96PX6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.52■□□□□ 0.87
CCDC85AQ96PX6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 TSSK5P-201ENST00000423978 907 ntBASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 AC007967.4-201ENST00000614700 386 ntBASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 AC079328.2-201ENST00000561241 3354 ntBASIC20.51■□□□□ 0.87
CCDC85AQ96PX6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 SERBP1P5-201ENST00000510079 1181 ntBASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 AL031731.1-201ENST00000642131 2094 ntBASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC85AQ96PX6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
CCDC85AQ96PX6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC85AQ96PX6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC85AQ96PX6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC85AQ96PX6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC85AQ96PX6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC85AQ96PX6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC85AQ96PX6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC85AQ96PX6 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CCDC85AQ96PX6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
CCDC85AQ96PX6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
CCDC85AQ96PX6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CCDC85AQ96PX6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC85AQ96PX6 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC85AQ96PX6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC85AQ96PX6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC85AQ96PX6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC85AQ96PX6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CCDC85AQ96PX6 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC85AQ96PX6 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC85AQ96PX6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC85AQ96PX6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms