Protein–RNA interactions for Protein: Q96P20

NLRP3, NACHT, LRR and PYD domains-containing protein 3, humanhuman

Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3Q96P20 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NLRP3Q96P20 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NLRP3Q96P20 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NLRP3Q96P20 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NLRP3Q96P20 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
NLRP3Q96P20 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
NLRP3Q96P20 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.33■□□□□ 0.85
NLRP3Q96P20 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NLRP3Q96P20 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NLRP3Q96P20 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NLRP3Q96P20 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NLRP3Q96P20 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NLRP3Q96P20 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
NLRP3Q96P20 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NLRP3Q96P20 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.33■□□□□ 0.85
NLRP3Q96P20 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.33■□□□□ 0.85
NLRP3Q96P20 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NLRP3Q96P20 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NLRP3Q96P20 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
NLRP3Q96P20 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC20.33■□□□□ 0.85
NLRP3Q96P20 AP006294.1-201ENST00000415407 339 ntBASIC20.33■□□□□ 0.85
NLRP3Q96P20 ARSEP1-201ENST00000420443 635 ntBASIC20.33■□□□□ 0.85
NLRP3Q96P20 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
NLRP3Q96P20 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
NLRP3Q96P20 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.33■□□□□ 0.85
NLRP3Q96P20 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NLRP3Q96P20 GIMAP3P-201ENST00000495150 836 ntBASIC20.33■□□□□ 0.85
NLRP3Q96P20 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NLRP3Q96P20 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC20.33■□□□□ 0.85
NLRP3Q96P20 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.33■□□□□ 0.85
NLRP3Q96P20 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.33■□□□□ 0.85
NLRP3Q96P20 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NLRP3Q96P20 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.33■□□□□ 0.85
NLRP3Q96P20 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.33■□□□□ 0.84
NLRP3Q96P20 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
NLRP3Q96P20 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NLRP3Q96P20 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.33■□□□□ 0.84
NLRP3Q96P20 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NLRP3Q96P20 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
NLRP3Q96P20 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.84
NLRP3Q96P20 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NLRP3Q96P20 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NLRP3Q96P20 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NLRP3Q96P20 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NLRP3Q96P20 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.33■□□□□ 0.84
NLRP3Q96P20 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NLRP3Q96P20 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NLRP3Q96P20 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.32■□□□□ 0.84
NLRP3Q96P20 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.32■□□□□ 0.84
NLRP3Q96P20 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.32■□□□□ 0.84
NLRP3Q96P20 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.32■□□□□ 0.84
NLRP3Q96P20 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.32■□□□□ 0.84
NLRP3Q96P20 AC026471.1-201ENST00000564629 3026 ntBASIC20.32■□□□□ 0.84
NLRP3Q96P20 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.32■□□□□ 0.84
NLRP3Q96P20 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.32■□□□□ 0.84
NLRP3Q96P20 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC20.32■□□□□ 0.84
NLRP3Q96P20 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NLRP3Q96P20 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NLRP3Q96P20 AC141586.5-201ENST00000624546 2050 ntBASIC20.32■□□□□ 0.84
NLRP3Q96P20 AL031731.1-201ENST00000642131 2094 ntBASIC20.32■□□□□ 0.84
NLRP3Q96P20 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NLRP3Q96P20 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NLRP3Q96P20 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
NLRP3Q96P20 RN7SL752P-201ENST00000463779 287 ntBASIC20.32■□□□□ 0.84
NLRP3Q96P20 SPDYE18-201ENST00000510091 1050 ntBASIC20.32■□□□□ 0.84
NLRP3Q96P20 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
NLRP3Q96P20 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NLRP3Q96P20 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.32■□□□□ 0.84
NLRP3Q96P20 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NLRP3Q96P20 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NLRP3Q96P20 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.32■□□□□ 0.84
NLRP3Q96P20 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.32■□□□□ 0.84
NLRP3Q96P20 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NLRP3Q96P20 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NLRP3Q96P20 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.32■□□□□ 0.84
NLRP3Q96P20 OR6D1P-202ENST00000641007 5290 ntBASIC20.32■□□□□ 0.84
NLRP3Q96P20 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.31■□□□□ 0.84
NLRP3Q96P20 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.31■□□□□ 0.84
NLRP3Q96P20 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.31■□□□□ 0.84
NLRP3Q96P20 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NLRP3Q96P20 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NLRP3Q96P20 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NLRP3Q96P20 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NLRP3Q96P20 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.31■□□□□ 0.84
NLRP3Q96P20 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NLRP3Q96P20 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC20.31■□□□□ 0.84
NLRP3Q96P20 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NLRP3Q96P20 INE1-201ENST00000456273 945 ntBASIC20.31■□□□□ 0.84
NLRP3Q96P20 GPR53P-205ENST00000457298 1084 ntBASIC20.31■□□□□ 0.84
NLRP3Q96P20 SDHAP3-202ENST00000515467 728 ntBASIC20.31■□□□□ 0.84
NLRP3Q96P20 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC20.31■□□□□ 0.84
NLRP3Q96P20 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.31■□□□□ 0.84
NLRP3Q96P20 AC008494.3-201ENST00000606615 944 ntBASIC20.31■□□□□ 0.84
NLRP3Q96P20 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.31■□□□□ 0.84
NLRP3Q96P20 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.31■□□□□ 0.84
NLRP3Q96P20 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.31■□□□□ 0.84
NLRP3Q96P20 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.31■□□□□ 0.84
NLRP3Q96P20 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NLRP3Q96P20 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NLRP3Q96P20 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms