Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP6NLQ92738 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP6NLQ92738 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.65■□□□□ 0.58
USP6NLQ92738 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP6NLQ92738 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
USP6NLQ92738 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
USP6NLQ92738 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
USP6NLQ92738 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
USP6NLQ92738 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.65■□□□□ 0.58
USP6NLQ92738 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.65■□□□□ 0.58
USP6NLQ92738 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
USP6NLQ92738 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
USP6NLQ92738 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.64■□□□□ 0.58
USP6NLQ92738 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
USP6NLQ92738 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.64■□□□□ 0.58
USP6NLQ92738 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.64■□□□□ 0.57
USP6NLQ92738 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP6NLQ92738 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP6NLQ92738 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP6NLQ92738 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP6NLQ92738 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.64■□□□□ 0.57
USP6NLQ92738 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.64■□□□□ 0.57
USP6NLQ92738 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP6NLQ92738 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.64■□□□□ 0.57
USP6NLQ92738 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.64■□□□□ 0.57
USP6NLQ92738 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
USP6NLQ92738 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP6NLQ92738 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP6NLQ92738 AC055876.2-201ENST00000531834 546 ntBASIC18.64■□□□□ 0.57
USP6NLQ92738 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.64■□□□□ 0.57
USP6NLQ92738 RAB43P1-201ENST00000561790 589 ntBASIC18.64■□□□□ 0.57
USP6NLQ92738 AC061975.2-201ENST00000581722 295 ntBASIC18.64■□□□□ 0.57
USP6NLQ92738 AC099568.2-201ENST00000609194 695 ntBASIC18.64■□□□□ 0.57
USP6NLQ92738 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.64■□□□□ 0.57
USP6NLQ92738 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP6NLQ92738 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP6NLQ92738 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP6NLQ92738 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
USP6NLQ92738 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP6NLQ92738 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP6NLQ92738 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP6NLQ92738 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP6NLQ92738 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.63■□□□□ 0.57
USP6NLQ92738 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.63■□□□□ 0.57
USP6NLQ92738 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
USP6NLQ92738 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP6NLQ92738 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP6NLQ92738 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP6NLQ92738 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP6NLQ92738 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP6NLQ92738 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.63■□□□□ 0.57
USP6NLQ92738 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP6NLQ92738 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP6NLQ92738 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP6NLQ92738 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP6NLQ92738 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP6NLQ92738 MIR658-201ENST00000385210 100 ntBASIC18.63■□□□□ 0.57
USP6NLQ92738 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.63■□□□□ 0.57
USP6NLQ92738 AC093724.1-201ENST00000448659 1027 ntBASIC18.63■□□□□ 0.57
USP6NLQ92738 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.63■□□□□ 0.57
USP6NLQ92738 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.63■□□□□ 0.57
USP6NLQ92738 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.63■□□□□ 0.57
USP6NLQ92738 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP6NLQ92738 AC004461.2-201ENST00000629517 803 ntBASIC18.63■□□□□ 0.57
USP6NLQ92738 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
USP6NLQ92738 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP6NLQ92738 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.63■□□□□ 0.57
USP6NLQ92738 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP6NLQ92738 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP6NLQ92738 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP6NLQ92738 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP6NLQ92738 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP6NLQ92738 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.62■□□□□ 0.57
USP6NLQ92738 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP6NLQ92738 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP6NLQ92738 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP6NLQ92738 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP6NLQ92738 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.62■□□□□ 0.57
USP6NLQ92738 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP6NLQ92738 SERBP1P3-201ENST00000459980 809 ntBASIC18.62■□□□□ 0.57
USP6NLQ92738 ELK1P1-201ENST00000485699 580 ntBASIC18.62■□□□□ 0.57
USP6NLQ92738 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
USP6NLQ92738 SDHAP3-202ENST00000515467 728 ntBASIC18.62■□□□□ 0.57
USP6NLQ92738 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.62■□□□□ 0.57
USP6NLQ92738 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.62■□□□□ 0.57
USP6NLQ92738 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.62■□□□□ 0.57
USP6NLQ92738 CTBP2P3-201ENST00000585629 1255 ntBASIC18.62■□□□□ 0.57
USP6NLQ92738 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.62■□□□□ 0.57
USP6NLQ92738 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.62■□□□□ 0.57
USP6NLQ92738 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.62■□□□□ 0.57
USP6NLQ92738 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
USP6NLQ92738 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
USP6NLQ92738 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP6NLQ92738 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP6NLQ92738 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.62■□□□□ 0.57
USP6NLQ92738 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18.62■□□□□ 0.57
USP6NLQ92738 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
USP6NLQ92738 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
USP6NLQ92738 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
USP6NLQ92738 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms