Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 AC005052.1-201ENST00000625181 2492 ntBASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 AC068418.2-201ENST00000577309 3703 ntBASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 AC012313.10-201ENST00000623509 926 ntBASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 LINC00895-201ENST00000629028 1637 ntBASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RTN4IP1Q8WWV3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.02□□□□□ -0.16
RTN4IP1Q8WWV3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.02□□□□□ -0.16
RTN4IP1Q8WWV3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.02□□□□□ -0.16
RTN4IP1Q8WWV3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
RTN4IP1Q8WWV3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
RTN4IP1Q8WWV3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.02□□□□□ -0.16
RTN4IP1Q8WWV3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.02□□□□□ -0.16
RTN4IP1Q8WWV3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
RTN4IP1Q8WWV3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
RTN4IP1Q8WWV3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RTN4IP1Q8WWV3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
RTN4IP1Q8WWV3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.02□□□□□ -0.16
RTN4IP1Q8WWV3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 AL021920.2-201ENST00000624828 1351 ntBASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 REXO1L6P-202ENST00000619970 1078 ntBASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 AL139288.1-201ENST00000623748 933 ntBASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms