Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 MTDHP3-201ENST00000594186 672 ntBASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 AC069224.1-201ENST00000566372 1715 ntBASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.65■□□□□ 0.26
SLC44A1Q8WWI5 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SLC44A1Q8WWI5 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SLC44A1Q8WWI5 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SLC44A1Q8WWI5 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SLC44A1Q8WWI5 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.64■□□□□ 0.26
SLC44A1Q8WWI5 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 AL732292.2-201ENST00000609649 430 ntBASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 AL355877.3-201ENST00000622820 899 ntBASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 AL805961.1-202ENST00000641562 540 ntBASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC44A1Q8WWI5 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 SART3-203ENST00000546611 1184 ntBASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 AC087641.1-201ENST00000557561 1021 ntBASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC44A1Q8WWI5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms