Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 AC005412.3-201ENST00000580309 715 ntBASIC17.08■□□□□ 0.32
PAF1Q8N7H5 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 AC004877.2-201ENST00000623941 599 ntBASIC17.08■□□□□ 0.32
PAF1Q8N7H5 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PAF1Q8N7H5 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 KRT8P49-201ENST00000604166 1432 ntBASIC17.07■□□□□ 0.32
PAF1Q8N7H5 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.07■□□□□ 0.32
PAF1Q8N7H5 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 AC096734.2-201ENST00000562054 433 ntBASIC17.07■□□□□ 0.32
PAF1Q8N7H5 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 OR7E47P-204ENST00000575924 449 ntBASIC17.07■□□□□ 0.32
PAF1Q8N7H5 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PAF1Q8N7H5 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.06■□□□□ 0.32
PAF1Q8N7H5 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 TOP3BP1-201ENST00000420768 1380 ntBASIC17.06■□□□□ 0.32
PAF1Q8N7H5 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 IGLL3P-201ENST00000412472 434 ntBASIC17.06■□□□□ 0.32
PAF1Q8N7H5 KRT18P2-201ENST00000447938 1258 ntBASIC17.06■□□□□ 0.32
PAF1Q8N7H5 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PAF1Q8N7H5 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms