Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
SIX5Q8N196 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.96■□□□□ 0.31
SIX5Q8N196 LINC00304-203ENST00000565008 1864 ntBASIC16.96■□□□□ 0.31
SIX5Q8N196 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SIX5Q8N196 AC124067.4-201ENST00000519691 2379 ntBASIC16.96■□□□□ 0.31
SIX5Q8N196 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SIX5Q8N196 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.96■□□□□ 0.3
SIX5Q8N196 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
SIX5Q8N196 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SIX5Q8N196 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIX5Q8N196 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIX5Q8N196 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIX5Q8N196 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIX5Q8N196 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SIX5Q8N196 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIX5Q8N196 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.95■□□□□ 0.3
SIX5Q8N196 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIX5Q8N196 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SIX5Q8N196 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SIX5Q8N196 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SIX5Q8N196 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIX5Q8N196 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SIX5Q8N196 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIX5Q8N196 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIX5Q8N196 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIX5Q8N196 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.95■□□□□ 0.3
SIX5Q8N196 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SIX5Q8N196 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIX5Q8N196 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.95■□□□□ 0.3
SIX5Q8N196 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.95■□□□□ 0.3
SIX5Q8N196 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.95■□□□□ 0.3
SIX5Q8N196 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.95■□□□□ 0.3
SIX5Q8N196 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.95■□□□□ 0.3
SIX5Q8N196 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.95■□□□□ 0.3
SIX5Q8N196 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.95■□□□□ 0.3
SIX5Q8N196 CYP2A7P1-201ENST00000595391 815 ntBASIC16.95■□□□□ 0.3
SIX5Q8N196 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
SIX5Q8N196 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.95■□□□□ 0.3
SIX5Q8N196 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.95■□□□□ 0.3
SIX5Q8N196 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIX5Q8N196 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIX5Q8N196 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SIX5Q8N196 AC138028.4-201ENST00000564984 1845 ntBASIC16.95■□□□□ 0.3
SIX5Q8N196 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SIX5Q8N196 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SIX5Q8N196 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SIX5Q8N196 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.95■□□□□ 0.3
SIX5Q8N196 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SIX5Q8N196 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
SIX5Q8N196 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SIX5Q8N196 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIX5Q8N196 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SIX5Q8N196 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SIX5Q8N196 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIX5Q8N196 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIX5Q8N196 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.94■□□□□ 0.3
SIX5Q8N196 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIX5Q8N196 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SIX5Q8N196 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SIX5Q8N196 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIX5Q8N196 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SIX5Q8N196 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIX5Q8N196 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SIX5Q8N196 TTTY23B-201ENST00000442790 549 ntBASIC16.94■□□□□ 0.3
SIX5Q8N196 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.94■□□□□ 0.3
SIX5Q8N196 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.94■□□□□ 0.3
SIX5Q8N196 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.94■□□□□ 0.3
SIX5Q8N196 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.94■□□□□ 0.3
SIX5Q8N196 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
SIX5Q8N196 AL079307.3-201ENST00000556114 283 ntBASIC16.94■□□□□ 0.3
SIX5Q8N196 AC105021.1-202ENST00000570572 669 ntBASIC16.94■□□□□ 0.3
SIX5Q8N196 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.94■□□□□ 0.3
SIX5Q8N196 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.94■□□□□ 0.3
SIX5Q8N196 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
SIX5Q8N196 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.94■□□□□ 0.3
SIX5Q8N196 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.94■□□□□ 0.3
SIX5Q8N196 LINC00895-201ENST00000629028 1637 ntBASIC16.94■□□□□ 0.3
SIX5Q8N196 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SIX5Q8N196 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIX5Q8N196 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SIX5Q8N196 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIX5Q8N196 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SIX5Q8N196 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIX5Q8N196 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.94■□□□□ 0.3
SIX5Q8N196 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SIX5Q8N196 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SIX5Q8N196 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SIX5Q8N196 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIX5Q8N196 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.93■□□□□ 0.3
SIX5Q8N196 NFIC-211ENST00000641145 8399 ntBASIC16.93■□□□□ 0.3
SIX5Q8N196 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SIX5Q8N196 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SIX5Q8N196 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIX5Q8N196 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIX5Q8N196 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SIX5Q8N196 AL023806.1-201ENST00000603994 1649 ntBASIC16.93■□□□□ 0.3
SIX5Q8N196 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SIX5Q8N196 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIX5Q8N196 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SIX5Q8N196 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms