Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 PRYP6-201ENST00000514804 343 ntBASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 ALG1L8P-201ENST00000533887 760 ntBASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 AC026150.2-201ENST00000564693 1156 ntBASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 AP001059.3-201ENST00000619053 235 ntBASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 AL139011.1-202ENST00000642063 584 ntBASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 AC026471.1-201ENST00000564629 3026 ntBASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 AC105233.2-201ENST00000523697 349 ntBASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 AF228730.5-201ENST00000530288 346 ntBASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 AC084121.4-201ENST00000641598 221 ntBASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 AF228730.8-201ENST00000642140 221 ntBASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SCN4BQ8IWT1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SCN4BQ8IWT1 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SCN4BQ8IWT1 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.46■□□□□ 0.38
SCN4BQ8IWT1 RNF216P1-203ENST00000404404 2427 ntBASIC17.46■□□□□ 0.38
SCN4BQ8IWT1 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 AC080080.1-201ENST00000625121 2420 ntBASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 SPDYE14P-201ENST00000442619 822 ntBASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 CNN2P2-201ENST00000443536 909 ntBASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 CNN2P3-201ENST00000450201 906 ntBASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 AL136317.3-201ENST00000618497 906 ntBASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms