Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 AC021087.4-201ENST00000563761 564 ntBASIC16.98■□□□□ 0.31
CASC4Q6P4E1 AC006557.2-201ENST00000592985 1240 ntBASIC16.98■□□□□ 0.31
CASC4Q6P4E1 AC025062.2-201ENST00000605477 670 ntBASIC16.98■□□□□ 0.31
CASC4Q6P4E1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.98■□□□□ 0.31
CASC4Q6P4E1 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 AKR1C7P-201ENST00000305623 895 ntBASIC16.97■□□□□ 0.31
CASC4Q6P4E1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 MPDU1-223ENST00000582151 728 ntBASIC16.97■□□□□ 0.31
CASC4Q6P4E1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 AC012313.10-201ENST00000623509 926 ntBASIC16.97■□□□□ 0.31
CASC4Q6P4E1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CASC4Q6P4E1 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CASC4Q6P4E1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms