Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.22■□□□□ 0.35
EFEMP1Q12805 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EFEMP1Q12805 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EFEMP1Q12805 HLA-A-202ENST00000376806 1854 ntBASIC17.22■□□□□ 0.35
EFEMP1Q12805 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EFEMP1Q12805 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
EFEMP1Q12805 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
EFEMP1Q12805 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EFEMP1Q12805 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EFEMP1Q12805 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
EFEMP1Q12805 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.22■□□□□ 0.35
EFEMP1Q12805 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.22■□□□□ 0.35
EFEMP1Q12805 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
EFEMP1Q12805 GGT4P-201ENST00000623672 1708 ntBASIC17.21■□□□□ 0.35
EFEMP1Q12805 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.21■□□□□ 0.35
EFEMP1Q12805 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EFEMP1Q12805 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EFEMP1Q12805 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EFEMP1Q12805 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
EFEMP1Q12805 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EFEMP1Q12805 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EFEMP1Q12805 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EFEMP1Q12805 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EFEMP1Q12805 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
EFEMP1Q12805 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EFEMP1Q12805 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.21■□□□□ 0.35
EFEMP1Q12805 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.21■□□□□ 0.35
EFEMP1Q12805 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EFEMP1Q12805 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.21■□□□□ 0.35
EFEMP1Q12805 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.21■□□□□ 0.35
EFEMP1Q12805 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.21■□□□□ 0.35
EFEMP1Q12805 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.21■□□□□ 0.35
EFEMP1Q12805 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
EFEMP1Q12805 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EFEMP1Q12805 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
EFEMP1Q12805 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.21■□□□□ 0.34
EFEMP1Q12805 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
EFEMP1Q12805 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.21■□□□□ 0.34
EFEMP1Q12805 AD000864.1-201ENST00000624076 2295 ntBASIC17.21■□□□□ 0.34
EFEMP1Q12805 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EFEMP1Q12805 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EFEMP1Q12805 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EFEMP1Q12805 AC073439.1-201ENST00000624121 1774 ntBASIC17.2■□□□□ 0.34
EFEMP1Q12805 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
EFEMP1Q12805 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.2■□□□□ 0.34
EFEMP1Q12805 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EFEMP1Q12805 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.2■□□□□ 0.34
EFEMP1Q12805 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.2■□□□□ 0.34
EFEMP1Q12805 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
EFEMP1Q12805 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EFEMP1Q12805 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EFEMP1Q12805 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EFEMP1Q12805 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EFEMP1Q12805 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
EFEMP1Q12805 MIR346-201ENST00000362234 95 ntBASIC17.2■□□□□ 0.34
EFEMP1Q12805 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.2■□□□□ 0.34
EFEMP1Q12805 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
EFEMP1Q12805 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.2■□□□□ 0.34
EFEMP1Q12805 AL645939.2-201ENST00000427340 991 ntBASIC17.2■□□□□ 0.34
EFEMP1Q12805 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.2■□□□□ 0.34
EFEMP1Q12805 GPS2P2-201ENST00000430745 888 ntBASIC17.2■□□□□ 0.34
EFEMP1Q12805 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.2■□□□□ 0.34
EFEMP1Q12805 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.2■□□□□ 0.34
EFEMP1Q12805 AC105233.2-201ENST00000523697 349 ntBASIC17.2■□□□□ 0.34
EFEMP1Q12805 AF228730.5-201ENST00000530288 346 ntBASIC17.2■□□□□ 0.34
EFEMP1Q12805 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
EFEMP1Q12805 AC025678.2-201ENST00000562061 970 ntBASIC17.2■□□□□ 0.34
EFEMP1Q12805 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.2■□□□□ 0.34
EFEMP1Q12805 AC106028.4-201ENST00000614509 607 ntBASIC17.2■□□□□ 0.34
EFEMP1Q12805 AC084121.4-201ENST00000641598 221 ntBASIC17.2■□□□□ 0.34
EFEMP1Q12805 AF228730.8-201ENST00000642140 221 ntBASIC17.2■□□□□ 0.34
EFEMP1Q12805 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
EFEMP1Q12805 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.2■□□□□ 0.34
EFEMP1Q12805 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EFEMP1Q12805 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EFEMP1Q12805 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EFEMP1Q12805 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EFEMP1Q12805 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.2■□□□□ 0.34
EFEMP1Q12805 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EFEMP1Q12805 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EFEMP1Q12805 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EFEMP1Q12805 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
EFEMP1Q12805 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
EFEMP1Q12805 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.2■□□□□ 0.34
EFEMP1Q12805 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.2■□□□□ 0.34
EFEMP1Q12805 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
EFEMP1Q12805 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EFEMP1Q12805 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EFEMP1Q12805 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EFEMP1Q12805 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EFEMP1Q12805 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
EFEMP1Q12805 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
EFEMP1Q12805 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EFEMP1Q12805 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EFEMP1Q12805 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EFEMP1Q12805 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
EFEMP1Q12805 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.19■□□□□ 0.34
EFEMP1Q12805 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.19■□□□□ 0.34
EFEMP1Q12805 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.19■□□□□ 0.34
EFEMP1Q12805 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms