Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRP54P61011 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRP54P61011 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.37■□□□□ 0.21
SRP54P61011 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SRP54P61011 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRP54P61011 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.37■□□□□ 0.21
SRP54P61011 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SRP54P61011 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.36■□□□□ 0.21
SRP54P61011 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 AL671710.1-201ENST00000610245 2349 ntBASIC16.36■□□□□ 0.21
SRP54P61011 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.36■□□□□ 0.21
SRP54P61011 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SRP54P61011 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
SRP54P61011 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
SRP54P61011 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.36■□□□□ 0.21
SRP54P61011 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.36■□□□□ 0.21
SRP54P61011 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.36■□□□□ 0.21
SRP54P61011 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.36■□□□□ 0.21
SRP54P61011 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.36■□□□□ 0.21
SRP54P61011 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.36■□□□□ 0.21
SRP54P61011 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.36■□□□□ 0.21
SRP54P61011 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.36■□□□□ 0.21
SRP54P61011 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.36■□□□□ 0.21
SRP54P61011 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.36■□□□□ 0.21
SRP54P61011 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
SRP54P61011 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.36■□□□□ 0.21
SRP54P61011 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SRP54P61011 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.36■□□□□ 0.21
SRP54P61011 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SRP54P61011 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.36■□□□□ 0.21
SRP54P61011 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRP54P61011 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.35■□□□□ 0.21
SRP54P61011 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRP54P61011 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.35■□□□□ 0.21
SRP54P61011 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SRP54P61011 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SRP54P61011 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SRP54P61011 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
SRP54P61011 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRP54P61011 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRP54P61011 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SRP54P61011 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
SRP54P61011 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRP54P61011 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRP54P61011 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.35■□□□□ 0.21
SRP54P61011 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.35■□□□□ 0.21
SRP54P61011 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.35■□□□□ 0.21
SRP54P61011 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRP54P61011 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.35■□□□□ 0.21
SRP54P61011 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.35■□□□□ 0.21
SRP54P61011 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.35■□□□□ 0.21
SRP54P61011 AC011467.4-201ENST00000594891 528 ntBASIC16.35■□□□□ 0.21
SRP54P61011 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.35■□□□□ 0.21
SRP54P61011 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRP54P61011 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.35■□□□□ 0.21
SRP54P61011 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRP54P61011 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.35■□□□□ 0.21
SRP54P61011 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.35■□□□□ 0.21
SRP54P61011 TUBB3P1-201ENST00000405796 1332 ntBASIC16.35■□□□□ 0.21
SRP54P61011 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.35■□□□□ 0.21
SRP54P61011 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
SRP54P61011 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRP54P61011 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRP54P61011 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.35■□□□□ 0.21
SRP54P61011 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SRP54P61011 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SRP54P61011 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRP54P61011 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRP54P61011 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SRP54P61011 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SRP54P61011 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
SRP54P61011 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SRP54P61011 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SRP54P61011 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
SRP54P61011 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms