Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDC42P60953 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42P60953 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42P60953 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42P60953 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.23■□□□□ 0.03
CDC42P60953 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42P60953 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
CDC42P60953 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42P60953 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
CDC42P60953 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42P60953 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42P60953 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42P60953 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CDC42P60953 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.23■□□□□ 0.03
CDC42P60953 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42P60953 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.23■□□□□ 0.03
CDC42P60953 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42P60953 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.23■□□□□ 0.03
CDC42P60953 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42P60953 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42P60953 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.23■□□□□ 0.03
CDC42P60953 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CDC42P60953 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42P60953 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42P60953 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42P60953 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CDC42P60953 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CDC42P60953 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42P60953 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42P60953 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CDC42P60953 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CDC42P60953 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.23■□□□□ 0.03
CDC42P60953 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.23■□□□□ 0.03
CDC42P60953 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDC42P60953 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.23■□□□□ 0.03
CDC42P60953 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.23■□□□□ 0.03
CDC42P60953 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDC42P60953 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.23■□□□□ 0.03
CDC42P60953 AC133561.5-201ENST00000635547 218 ntBASIC15.23■□□□□ 0.03
CDC42P60953 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CDC42P60953 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.23■□□□□ 0.03
CDC42P60953 AL671710.1-201ENST00000610245 2349 ntBASIC15.23■□□□□ 0.03
CDC42P60953 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42P60953 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CDC42P60953 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CDC42P60953 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42P60953 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.23■□□□□ 0.03
CDC42P60953 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
CDC42P60953 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42P60953 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDC42P60953 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42P60953 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42P60953 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CDC42P60953 AC022532.1-201ENST00000624563 1728 ntBASIC15.23■□□□□ 0.03
CDC42P60953 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.23■□□□□ 0.03
CDC42P60953 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDC42P60953 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
CDC42P60953 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.22■□□□□ 0.03
CDC42P60953 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.22■□□□□ 0.03
CDC42P60953 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.22■□□□□ 0.03
CDC42P60953 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.22■□□□□ 0.03
CDC42P60953 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.22■□□□□ 0.03
CDC42P60953 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CDC42P60953 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC15.22■□□□□ 0.03
CDC42P60953 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 SPDYE13P-201ENST00000445314 798 ntBASIC15.22■□□□□ 0.03
CDC42P60953 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.22■□□□□ 0.03
CDC42P60953 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 AC012306.2-201ENST00000609350 630 ntBASIC15.22■□□□□ 0.03
CDC42P60953 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.22■□□□□ 0.03
CDC42P60953 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.22■□□□□ 0.03
CDC42P60953 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.22■□□□□ 0.03
CDC42P60953 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 PMPCAP1-201ENST00000508114 1576 ntBASIC15.22■□□□□ 0.03
CDC42P60953 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.22■□□□□ 0.03
CDC42P60953 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.22■□□□□ 0.03
CDC42P60953 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDC42P60953 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CDC42P60953 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms