Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.82□□□□□ -0.04
GFRA1P56159 CNN2P3-201ENST00000450201 906 ntBASIC14.82□□□□□ -0.04
GFRA1P56159 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.82□□□□□ -0.04
GFRA1P56159 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.82□□□□□ -0.04
GFRA1P56159 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.82□□□□□ -0.04
GFRA1P56159 SPTSSB-204ENST00000617024 1292 ntBASIC14.82□□□□□ -0.04
GFRA1P56159 AL136317.3-201ENST00000618497 906 ntBASIC14.82□□□□□ -0.04
GFRA1P56159 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
GFRA1P56159 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.82□□□□□ -0.04
GFRA1P56159 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
GFRA1P56159 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
GFRA1P56159 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.82□□□□□ -0.04
GFRA1P56159 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.82□□□□□ -0.04
GFRA1P56159 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GFRA1P56159 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
GFRA1P56159 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
GFRA1P56159 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
GFRA1P56159 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
GFRA1P56159 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
GFRA1P56159 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.81□□□□□ -0.04
GFRA1P56159 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.81□□□□□ -0.04
GFRA1P56159 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.81□□□□□ -0.04
GFRA1P56159 AC098859.1-201ENST00000502915 1238 ntBASIC14.81□□□□□ -0.04
GFRA1P56159 RARRES2P9-201ENST00000565168 469 ntBASIC14.81□□□□□ -0.04
GFRA1P56159 AC106028.4-201ENST00000614509 607 ntBASIC14.81□□□□□ -0.04
GFRA1P56159 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.81□□□□□ -0.04
GFRA1P56159 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
GFRA1P56159 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
GFRA1P56159 UBALD1-205ENST00000590891 2641 ntBASIC14.81□□□□□ -0.04
GFRA1P56159 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.81□□□□□ -0.04
GFRA1P56159 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
GFRA1P56159 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.81□□□□□ -0.04
GFRA1P56159 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
GFRA1P56159 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.81□□□□□ -0.04
GFRA1P56159 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.81□□□□□ -0.04
GFRA1P56159 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.81□□□□□ -0.04
GFRA1P56159 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.81□□□□□ -0.04
GFRA1P56159 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.81□□□□□ -0.04
GFRA1P56159 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 AD000864.1-201ENST00000624076 2295 ntBASIC14.81□□□□□ -0.04
GFRA1P56159 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GFRA1P56159 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.81□□□□□ -0.04
GFRA1P56159 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
GFRA1P56159 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
GFRA1P56159 AP3S2-216ENST00000617003 1561 ntBASIC14.81□□□□□ -0.04
GFRA1P56159 LINC01144-201ENST00000626198 1710 ntBASIC14.8□□□□□ -0.04
GFRA1P56159 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
GFRA1P56159 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GFRA1P56159 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.8□□□□□ -0.04
GFRA1P56159 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GFRA1P56159 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GFRA1P56159 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GFRA1P56159 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GFRA1P56159 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GFRA1P56159 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GFRA1P56159 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GFRA1P56159 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GFRA1P56159 FAM220BP-201ENST00000377689 816 ntBASIC14.8□□□□□ -0.04
GFRA1P56159 HLA-H-201ENST00000383620 1096 ntBASIC14.8□□□□□ -0.04
GFRA1P56159 SPDYE7P-202ENST00000420373 878 ntBASIC14.8□□□□□ -0.04
GFRA1P56159 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.8□□□□□ -0.04
GFRA1P56159 FAM86GP-201ENST00000448322 971 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms