Protein–RNA interactions for Protein: P48995

TRPC1, Short transient receptor potential channel 1, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPC1P48995 LINC02199-201ENST00000506655 2702 ntBASIC16.07■□□□□ 0.16
TRPC1P48995 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRPC1P48995 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRPC1P48995 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRPC1P48995 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRPC1P48995 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.07■□□□□ 0.16
TRPC1P48995 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
TRPC1P48995 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TRPC1P48995 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.07■□□□□ 0.16
TRPC1P48995 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRPC1P48995 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRPC1P48995 AC073592.4-201ENST00000623827 446 ntBASIC16.07■□□□□ 0.16
TRPC1P48995 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.07■□□□□ 0.16
TRPC1P48995 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.07■□□□□ 0.16
TRPC1P48995 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRPC1P48995 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRPC1P48995 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.07■□□□□ 0.16
TRPC1P48995 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRPC1P48995 AC006538.1-201ENST00000567905 1585 ntBASIC16.07■□□□□ 0.16
TRPC1P48995 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRPC1P48995 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.07■□□□□ 0.16
TRPC1P48995 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRPC1P48995 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRPC1P48995 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.07■□□□□ 0.16
TRPC1P48995 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRPC1P48995 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRPC1P48995 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TRPC1P48995 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRPC1P48995 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.07■□□□□ 0.16
TRPC1P48995 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRPC1P48995 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.07■□□□□ 0.16
TRPC1P48995 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRPC1P48995 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 MIR600HG-201ENST00000449175 5984 ntBASIC16.06■□□□□ 0.16
TRPC1P48995 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
TRPC1P48995 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.06■□□□□ 0.16
TRPC1P48995 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
TRPC1P48995 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.06■□□□□ 0.16
TRPC1P48995 AC004817.3-201ENST00000602957 2129 ntBASIC16.06■□□□□ 0.16
TRPC1P48995 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
TRPC1P48995 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.06■□□□□ 0.16
TRPC1P48995 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 KRT8P49-201ENST00000604166 1432 ntBASIC16.06■□□□□ 0.16
TRPC1P48995 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.06■□□□□ 0.16
TRPC1P48995 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRPC1P48995 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.06■□□□□ 0.16
TRPC1P48995 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.06■□□□□ 0.16
TRPC1P48995 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRPC1P48995 LINC00982-205ENST00000420957 435 ntBASIC16.06■□□□□ 0.16
TRPC1P48995 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.06■□□□□ 0.16
TRPC1P48995 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.06■□□□□ 0.16
TRPC1P48995 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
TRPC1P48995 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
TRPC1P48995 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.06■□□□□ 0.16
TRPC1P48995 SLC25A6P4-201ENST00000586535 553 ntBASIC16.06■□□□□ 0.16
TRPC1P48995 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.06■□□□□ 0.16
TRPC1P48995 AL355877.3-201ENST00000622820 899 ntBASIC16.06■□□□□ 0.16
TRPC1P48995 AL139011.1-202ENST00000642063 584 ntBASIC16.06■□□□□ 0.16
TRPC1P48995 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.06■□□□□ 0.16
TRPC1P48995 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.06■□□□□ 0.16
TRPC1P48995 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.06■□□□□ 0.16
TRPC1P48995 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
TRPC1P48995 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRPC1P48995 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
TRPC1P48995 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRPC1P48995 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRPC1P48995 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRPC1P48995 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.05■□□□□ 0.16
TRPC1P48995 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
TRPC1P48995 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRPC1P48995 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRPC1P48995 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.05■□□□□ 0.16
TRPC1P48995 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRPC1P48995 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRPC1P48995 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.05■□□□□ 0.16
TRPC1P48995 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRPC1P48995 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRPC1P48995 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms