Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HADHAP40939 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.81■□□□□ 0.28
HADHAP40939 AL022342.1-201ENST00000400363 863 ntBASIC16.81■□□□□ 0.28
HADHAP40939 CXCL1P1-201ENST00000502804 216 ntBASIC16.81■□□□□ 0.28
HADHAP40939 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.81■□□□□ 0.28
HADHAP40939 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
HADHAP40939 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.81■□□□□ 0.28
HADHAP40939 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HADHAP40939 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HADHAP40939 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
HADHAP40939 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.81■□□□□ 0.28
HADHAP40939 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HADHAP40939 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HADHAP40939 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.81■□□□□ 0.28
HADHAP40939 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.81■□□□□ 0.28
HADHAP40939 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.81■□□□□ 0.28
HADHAP40939 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.81■□□□□ 0.28
HADHAP40939 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HADHAP40939 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HADHAP40939 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HADHAP40939 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.81■□□□□ 0.28
HADHAP40939 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.81■□□□□ 0.28
HADHAP40939 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.81■□□□□ 0.28
HADHAP40939 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
HADHAP40939 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HADHAP40939 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HADHAP40939 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HADHAP40939 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HADHAP40939 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HADHAP40939 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.8■□□□□ 0.28
HADHAP40939 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HADHAP40939 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.8■□□□□ 0.28
HADHAP40939 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HADHAP40939 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HADHAP40939 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HADHAP40939 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.8■□□□□ 0.28
HADHAP40939 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HADHAP40939 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HADHAP40939 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HADHAP40939 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.8■□□□□ 0.28
HADHAP40939 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
HADHAP40939 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HADHAP40939 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HADHAP40939 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HADHAP40939 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
HADHAP40939 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.8■□□□□ 0.28
HADHAP40939 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HADHAP40939 FAM185BP-201ENST00000443595 716 ntBASIC16.8■□□□□ 0.28
HADHAP40939 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.8■□□□□ 0.28
HADHAP40939 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.8■□□□□ 0.28
HADHAP40939 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HADHAP40939 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.8■□□□□ 0.28
HADHAP40939 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.8■□□□□ 0.28
HADHAP40939 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HADHAP40939 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.8■□□□□ 0.28
HADHAP40939 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HADHAP40939 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HADHAP40939 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HADHAP40939 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.8■□□□□ 0.28
HADHAP40939 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
HADHAP40939 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HADHAP40939 PCDH8P1-201ENST00000428983 2773 ntBASIC16.8■□□□□ 0.28
HADHAP40939 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HADHAP40939 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HADHAP40939 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.8■□□□□ 0.28
HADHAP40939 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HADHAP40939 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HADHAP40939 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HADHAP40939 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.79■□□□□ 0.28
HADHAP40939 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.79■□□□□ 0.28
HADHAP40939 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HADHAP40939 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HADHAP40939 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
HADHAP40939 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HADHAP40939 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HADHAP40939 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HADHAP40939 SLC22A20-204ENST00000530038 1673 ntBASIC16.79■□□□□ 0.28
HADHAP40939 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HADHAP40939 IL9RP2-201ENST00000423948 1312 ntBASIC16.79■□□□□ 0.28
HADHAP40939 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.79■□□□□ 0.28
HADHAP40939 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.79■□□□□ 0.28
HADHAP40939 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HADHAP40939 ALOX12P2-203ENST00000570921 1945 ntBASIC16.79■□□□□ 0.28
HADHAP40939 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.79■□□□□ 0.28
HADHAP40939 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HADHAP40939 AL590627.1-203ENST00000421194 1026 ntBASIC16.79■□□□□ 0.28
HADHAP40939 PMS2P1-201ENST00000431037 1228 ntBASIC16.79■□□□□ 0.28
HADHAP40939 AP000347.1-202ENST00000435868 847 ntBASIC16.79■□□□□ 0.28
HADHAP40939 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HADHAP40939 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.79■□□□□ 0.28
HADHAP40939 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.79■□□□□ 0.28
HADHAP40939 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.79■□□□□ 0.28
HADHAP40939 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.79■□□□□ 0.28
HADHAP40939 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.79■□□□□ 0.28
HADHAP40939 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.79■□□□□ 0.28
HADHAP40939 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
HADHAP40939 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.79■□□□□ 0.28
HADHAP40939 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HADHAP40939 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HADHAP40939 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms