Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.28■□□□□ 0.2
BCKDHBP21953 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BCKDHBP21953 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BCKDHBP21953 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BCKDHBP21953 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.28■□□□□ 0.2
BCKDHBP21953 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BCKDHBP21953 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BCKDHBP21953 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BCKDHBP21953 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BCKDHBP21953 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
BCKDHBP21953 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BCKDHBP21953 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BCKDHBP21953 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BCKDHBP21953 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BCKDHBP21953 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
BCKDHBP21953 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.27■□□□□ 0.2
BCKDHBP21953 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.27■□□□□ 0.2
BCKDHBP21953 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
BCKDHBP21953 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.27■□□□□ 0.2
BCKDHBP21953 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
BCKDHBP21953 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BCKDHBP21953 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BCKDHBP21953 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BCKDHBP21953 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
BCKDHBP21953 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
BCKDHBP21953 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.27■□□□□ 0.2
BCKDHBP21953 AC093724.1-201ENST00000448659 1027 ntBASIC16.27■□□□□ 0.2
BCKDHBP21953 MYCLP2-201ENST00000449268 967 ntBASIC16.27■□□□□ 0.2
BCKDHBP21953 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.27■□□□□ 0.2
BCKDHBP21953 ELK1P1-201ENST00000485699 580 ntBASIC16.27■□□□□ 0.2
BCKDHBP21953 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.27■□□□□ 0.2
BCKDHBP21953 TPRX2P-201ENST00000535362 881 ntBASIC16.27■□□□□ 0.2
BCKDHBP21953 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
BCKDHBP21953 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.27■□□□□ 0.2
BCKDHBP21953 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
BCKDHBP21953 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
BCKDHBP21953 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.27■□□□□ 0.2
BCKDHBP21953 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
BCKDHBP21953 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.27■□□□□ 0.2
BCKDHBP21953 AC106886.1-201ENST00000568660 600 ntBASIC16.27■□□□□ 0.2
BCKDHBP21953 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.27■□□□□ 0.2
BCKDHBP21953 CTBP2P3-201ENST00000585629 1255 ntBASIC16.27■□□□□ 0.2
BCKDHBP21953 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.27■□□□□ 0.2
BCKDHBP21953 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.27■□□□□ 0.2
BCKDHBP21953 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.27■□□□□ 0.2
BCKDHBP21953 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.27■□□□□ 0.2
BCKDHBP21953 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BCKDHBP21953 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
BCKDHBP21953 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.27■□□□□ 0.2
BCKDHBP21953 CROCCP2-202ENST00000412962 2773 ntBASIC16.27■□□□□ 0.2
BCKDHBP21953 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BCKDHBP21953 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BCKDHBP21953 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BCKDHBP21953 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BCKDHBP21953 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.27■□□□□ 0.19
BCKDHBP21953 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
BCKDHBP21953 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.27■□□□□ 0.19
BCKDHBP21953 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BCKDHBP21953 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BCKDHBP21953 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BCKDHBP21953 KRT8P12-202ENST00000472924 1397 ntBASIC16.26■□□□□ 0.19
BCKDHBP21953 AC092068.3-201ENST00000587894 2016 ntBASIC16.26■□□□□ 0.19
BCKDHBP21953 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHBP21953 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHBP21953 LETM1P2-201ENST00000597330 2178 ntBASIC16.26■□□□□ 0.19
BCKDHBP21953 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
BCKDHBP21953 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHBP21953 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHBP21953 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
BCKDHBP21953 AC098850.1-201ENST00000419919 790 ntBASIC16.26■□□□□ 0.19
BCKDHBP21953 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHBP21953 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.26■□□□□ 0.19
BCKDHBP21953 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHBP21953 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.26■□□□□ 0.19
BCKDHBP21953 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.26■□□□□ 0.19
BCKDHBP21953 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.26■□□□□ 0.19
BCKDHBP21953 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.26■□□□□ 0.19
BCKDHBP21953 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.26■□□□□ 0.19
BCKDHBP21953 AL109936.8-201ENST00000641772 604 ntBASIC16.26■□□□□ 0.19
BCKDHBP21953 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
BCKDHBP21953 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHBP21953 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHBP21953 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHBP21953 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.26■□□□□ 0.19
BCKDHBP21953 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
BCKDHBP21953 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.26■□□□□ 0.19
BCKDHBP21953 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHBP21953 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.26■□□□□ 0.19
BCKDHBP21953 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BCKDHBP21953 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
BCKDHBP21953 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
BCKDHBP21953 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHBP21953 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHBP21953 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHBP21953 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.25■□□□□ 0.19
BCKDHBP21953 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHBP21953 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHBP21953 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHBP21953 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BCKDHBP21953 AL133373.2-201ENST00000623187 2828 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms