Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NF1P21359 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NF1P21359 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NF1P21359 NEFHP1-201ENST00000412845 2629 ntBASIC13.26□□□□□ -0.29
NF1P21359 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NF1P21359 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NF1P21359 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NF1P21359 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.26□□□□□ -0.29
NF1P21359 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
NF1P21359 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NF1P21359 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NF1P21359 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.26□□□□□ -0.29
NF1P21359 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.26□□□□□ -0.29
NF1P21359 IQSEC3P1-201ENST00000538799 536 ntBASIC13.26□□□□□ -0.29
NF1P21359 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.26□□□□□ -0.29
NF1P21359 AC011491.1-203ENST00000637688 543 ntBASIC13.26□□□□□ -0.29
NF1P21359 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.26□□□□□ -0.29
NF1P21359 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.25□□□□□ -0.29
NF1P21359 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
NF1P21359 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC13.25□□□□□ -0.29
NF1P21359 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 AC018470.1-201ENST00000624790 3129 ntBASIC13.25□□□□□ -0.29
NF1P21359 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
NF1P21359 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.25□□□□□ -0.29
NF1P21359 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 AL671710.1-201ENST00000610245 2349 ntBASIC13.25□□□□□ -0.29
NF1P21359 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
NF1P21359 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.25□□□□□ -0.29
NF1P21359 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.25□□□□□ -0.29
NF1P21359 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
NF1P21359 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC13.25□□□□□ -0.29
NF1P21359 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.25□□□□□ -0.29
NF1P21359 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
NF1P21359 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
NF1P21359 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.25□□□□□ -0.29
NF1P21359 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.25□□□□□ -0.29
NF1P21359 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.25□□□□□ -0.29
NF1P21359 AL162726.2-201ENST00000438986 1017 ntBASIC13.25□□□□□ -0.29
NF1P21359 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.25□□□□□ -0.29
NF1P21359 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
NF1P21359 AP006547.1-201ENST00000563435 692 ntBASIC13.25□□□□□ -0.29
NF1P21359 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NF1P21359 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC13.24□□□□□ -0.29
NF1P21359 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NF1P21359 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.24□□□□□ -0.29
NF1P21359 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.24□□□□□ -0.29
NF1P21359 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
NF1P21359 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.24□□□□□ -0.29
NF1P21359 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.24□□□□□ -0.29
NF1P21359 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.24□□□□□ -0.29
NF1P21359 AC126915.1-201ENST00000522847 1038 ntBASIC13.24□□□□□ -0.29
NF1P21359 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC13.24□□□□□ -0.29
NF1P21359 AC141586.1-203ENST00000567242 366 ntBASIC13.24□□□□□ -0.29
NF1P21359 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC13.24□□□□□ -0.29
NF1P21359 AL391069.4-201ENST00000609583 481 ntBASIC13.24□□□□□ -0.29
NF1P21359 AP000346.4-201ENST00000614827 381 ntBASIC13.24□□□□□ -0.29
NF1P21359 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.24□□□□□ -0.29
NF1P21359 AL353726.2-201ENST00000623259 884 ntBASIC13.24□□□□□ -0.29
NF1P21359 AC004461.2-201ENST00000629517 803 ntBASIC13.24□□□□□ -0.29
NF1P21359 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
NF1P21359 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
NF1P21359 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.24□□□□□ -0.29
NF1P21359 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.24□□□□□ -0.29
NF1P21359 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
NF1P21359 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NF1P21359 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.24□□□□□ -0.29
NF1P21359 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NF1P21359 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
NF1P21359 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
NF1P21359 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
NF1P21359 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.24□□□□□ -0.29
NF1P21359 PRYP6-201ENST00000514804 343 ntBASIC13.24□□□□□ -0.29
NF1P21359 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.24□□□□□ -0.29
NF1P21359 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.24□□□□□ -0.29
NF1P21359 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
NF1P21359 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.24□□□□□ -0.29
NF1P21359 AC073439.1-201ENST00000624121 1774 ntBASIC13.24□□□□□ -0.29
NF1P21359 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
NF1P21359 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms