Protein–RNA interactions for Protein: P08034

GJB1, Gap junction beta-1 protein, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1P08034 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.62■□□□□ 0.57
GJB1P08034 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GJB1P08034 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GJB1P08034 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GJB1P08034 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GJB1P08034 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
GJB1P08034 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
GJB1P08034 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GJB1P08034 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
GJB1P08034 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GJB1P08034 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GJB1P08034 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GJB1P08034 AC092068.3-201ENST00000587894 2016 ntBASIC18.61■□□□□ 0.57
GJB1P08034 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.61■□□□□ 0.57
GJB1P08034 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.61■□□□□ 0.57
GJB1P08034 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GJB1P08034 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.61■□□□□ 0.57
GJB1P08034 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GJB1P08034 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.61■□□□□ 0.57
GJB1P08034 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.61■□□□□ 0.57
GJB1P08034 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.61■□□□□ 0.57
GJB1P08034 ELK1P1-201ENST00000485699 580 ntBASIC18.61■□□□□ 0.57
GJB1P08034 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.61■□□□□ 0.57
GJB1P08034 SPDYE18-201ENST00000510091 1050 ntBASIC18.61■□□□□ 0.57
GJB1P08034 AC104989.1-201ENST00000519711 778 ntBASIC18.61■□□□□ 0.57
GJB1P08034 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.61■□□□□ 0.57
GJB1P08034 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.61■□□□□ 0.57
GJB1P08034 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.61■□□□□ 0.57
GJB1P08034 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
GJB1P08034 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC18.61■□□□□ 0.57
GJB1P08034 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.61■□□□□ 0.57
GJB1P08034 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.61■□□□□ 0.57
GJB1P08034 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
GJB1P08034 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.61■□□□□ 0.57
GJB1P08034 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.61■□□□□ 0.57
GJB1P08034 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
GJB1P08034 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
GJB1P08034 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.61■□□□□ 0.57
GJB1P08034 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
GJB1P08034 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.61■□□□□ 0.57
GJB1P08034 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.61■□□□□ 0.57
GJB1P08034 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.61■□□□□ 0.57
GJB1P08034 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GJB1P08034 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GJB1P08034 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GJB1P08034 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.6■□□□□ 0.57
GJB1P08034 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GJB1P08034 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GJB1P08034 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
GJB1P08034 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.6■□□□□ 0.57
GJB1P08034 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.6■□□□□ 0.57
GJB1P08034 PCDHB18P-201ENST00000524813 2368 ntBASIC18.6■□□□□ 0.57
GJB1P08034 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
GJB1P08034 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GJB1P08034 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GJB1P08034 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
GJB1P08034 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GJB1P08034 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
GJB1P08034 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.6■□□□□ 0.57
GJB1P08034 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GJB1P08034 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
GJB1P08034 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.6■□□□□ 0.57
GJB1P08034 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
GJB1P08034 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.6■□□□□ 0.57
GJB1P08034 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GJB1P08034 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.6■□□□□ 0.57
GJB1P08034 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.6■□□□□ 0.57
GJB1P08034 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.6■□□□□ 0.57
GJB1P08034 AL512361.1-201ENST00000554200 418 ntBASIC18.6■□□□□ 0.57
GJB1P08034 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.6■□□□□ 0.57
GJB1P08034 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.6■□□□□ 0.57
GJB1P08034 MPDU1-223ENST00000582151 728 ntBASIC18.6■□□□□ 0.57
GJB1P08034 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.6■□□□□ 0.57
GJB1P08034 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.6■□□□□ 0.57
GJB1P08034 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.6■□□□□ 0.57
GJB1P08034 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.6■□□□□ 0.57
GJB1P08034 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GJB1P08034 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
GJB1P08034 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GJB1P08034 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.6■□□□□ 0.57
GJB1P08034 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GJB1P08034 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GJB1P08034 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.6■□□□□ 0.57
GJB1P08034 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
GJB1P08034 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.6■□□□□ 0.57
GJB1P08034 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GJB1P08034 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
GJB1P08034 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GJB1P08034 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GJB1P08034 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
GJB1P08034 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GJB1P08034 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GJB1P08034 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GJB1P08034 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
GJB1P08034 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
GJB1P08034 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.59■□□□□ 0.57
GJB1P08034 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.59■□□□□ 0.57
GJB1P08034 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.59■□□□□ 0.57
GJB1P08034 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GJB1P08034 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms