Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
APPP05067 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
APPP05067 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APPP05067 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
APPP05067 AL355306.1-201ENST00000415580 579 ntBASIC19.92■□□□□ 0.78
APPP05067 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
APPP05067 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
APPP05067 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.92■□□□□ 0.78
APPP05067 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
APPP05067 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
APPP05067 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
APPP05067 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APPP05067 AC011676.5-201ENST00000624864 2660 ntBASIC19.92■□□□□ 0.78
APPP05067 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APPP05067 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APPP05067 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APPP05067 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APPP05067 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APPP05067 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APPP05067 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.92■□□□□ 0.78
APPP05067 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.92■□□□□ 0.78
APPP05067 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
APPP05067 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.92■□□□□ 0.78
APPP05067 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
APPP05067 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
APPP05067 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APPP05067 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
APPP05067 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.91■□□□□ 0.78
APPP05067 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APPP05067 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.91■□□□□ 0.78
APPP05067 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
APPP05067 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APPP05067 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APPP05067 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APPP05067 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
APPP05067 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.91■□□□□ 0.78
APPP05067 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APPP05067 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.91■□□□□ 0.78
APPP05067 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.91■□□□□ 0.78
APPP05067 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.91■□□□□ 0.78
APPP05067 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APPP05067 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
APPP05067 TIMM8BP1-201ENST00000452384 211 ntBASIC19.91■□□□□ 0.78
APPP05067 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.91■□□□□ 0.78
APPP05067 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.91■□□□□ 0.78
APPP05067 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.91■□□□□ 0.78
APPP05067 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
APPP05067 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.91■□□□□ 0.78
APPP05067 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APPP05067 SNHG9-202ENST00000564014 471 ntBASIC19.91■□□□□ 0.78
APPP05067 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
APPP05067 MIR3909-201ENST00000579518 119 ntBASIC19.91■□□□□ 0.78
APPP05067 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.91■□□□□ 0.78
APPP05067 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
APPP05067 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
APPP05067 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APPP05067 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
APPP05067 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
APPP05067 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APPP05067 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.91■□□□□ 0.78
APPP05067 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
APPP05067 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
APPP05067 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
APPP05067 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
APPP05067 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APPP05067 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
APPP05067 FLJ38576-201ENST00000623820 2459 ntBASIC19.91■□□□□ 0.78
APPP05067 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
APPP05067 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
APPP05067 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APPP05067 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APPP05067 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
APPP05067 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APPP05067 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
APPP05067 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APPP05067 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APPP05067 TFAMP1-201ENST00000412727 736 ntBASIC19.9■□□□□ 0.78
APPP05067 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.9■□□□□ 0.78
APPP05067 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APPP05067 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.9■□□□□ 0.78
APPP05067 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.9■□□□□ 0.78
APPP05067 FAM86C2P-203ENST00000528684 1004 ntBASIC19.9■□□□□ 0.78
APPP05067 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APPP05067 RARRES2P8-201ENST00000566335 367 ntBASIC19.9■□□□□ 0.78
APPP05067 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.9■□□□□ 0.78
APPP05067 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.9■□□□□ 0.78
APPP05067 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.9■□□□□ 0.78
APPP05067 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
APPP05067 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APPP05067 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.9■□□□□ 0.78
APPP05067 AC079781.4-201ENST00000641908 219 ntBASIC19.9■□□□□ 0.78
APPP05067 AL139011.1-202ENST00000642063 584 ntBASIC19.9■□□□□ 0.78
APPP05067 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
APPP05067 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APPP05067 TNRC18P3-201ENST00000441896 2691 ntBASIC19.9■□□□□ 0.78
APPP05067 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APPP05067 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
APPP05067 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
APPP05067 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
APPP05067 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms