Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 PI4KAP1-204ENST00000612579 1703 ntBASIC14.97□□□□□ -0.01
HLA-DQA2P01906 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQA2P01906 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 SART3-203ENST00000546611 1184 ntBASIC14.96□□□□□ -0.01
HLA-DQA2P01906 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.96□□□□□ -0.01
HLA-DQA2P01906 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DQA2P01906 TOP3BP1-201ENST00000420768 1380 ntBASIC14.96□□□□□ -0.02
HLA-DQA2P01906 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DQA2P01906 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC14.96□□□□□ -0.02
HLA-DQA2P01906 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DQA2P01906 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DQA2P01906 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
HLA-DQA2P01906 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
HLA-DQA2P01906 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DQA2P01906 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DQA2P01906 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 CYP2T1P-202ENST00000641596 2535 ntBASIC14.95□□□□□ -0.02
HLA-DQA2P01906 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms