Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.18□□□□□ -0.3
IFNA1P01562 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
IFNA1P01562 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
IFNA1P01562 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
IFNA1P01562 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.18□□□□□ -0.3
IFNA1P01562 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.18□□□□□ -0.3
IFNA1P01562 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
IFNA1P01562 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
IFNA1P01562 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
IFNA1P01562 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.18□□□□□ -0.3
IFNA1P01562 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
IFNA1P01562 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
IFNA1P01562 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.17□□□□□ -0.3
IFNA1P01562 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
IFNA1P01562 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
IFNA1P01562 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
IFNA1P01562 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 GAD2-202ENST00000376248 680 ntTSL 5 BASIC13.17□□□□□ -0.3
IFNA1P01562 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.17□□□□□ -0.3
IFNA1P01562 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
IFNA1P01562 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.17□□□□□ -0.3
IFNA1P01562 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 AP005242.2-201ENST00000580065 1175 ntBASIC13.17□□□□□ -0.3
IFNA1P01562 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC13.17□□□□□ -0.3
IFNA1P01562 TK1-205ENST00000590862 642 ntTSL 3 BASIC13.17□□□□□ -0.3
IFNA1P01562 AC019129.2-201ENST00000609837 1235 ntBASIC13.17□□□□□ -0.3
IFNA1P01562 GAMT-205ENST00000640762 751 ntTSL 5 BASIC13.17□□□□□ -0.3
IFNA1P01562 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
IFNA1P01562 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.17□□□□□ -0.3
IFNA1P01562 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.17□□□□□ -0.3
IFNA1P01562 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.17□□□□□ -0.3
IFNA1P01562 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
IFNA1P01562 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.17□□□□□ -0.3
IFNA1P01562 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
IFNA1P01562 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFNA1P01562 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
IFNA1P01562 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFNA1P01562 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.16□□□□□ -0.3
IFNA1P01562 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFNA1P01562 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.16□□□□□ -0.3
IFNA1P01562 AC097374.2-201ENST00000618617 1306 ntBASIC13.16□□□□□ -0.3
IFNA1P01562 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.16□□□□□ -0.3
IFNA1P01562 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
IFNA1P01562 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFNA1P01562 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
IFNA1P01562 AC097637.2-201ENST00000624096 1997 ntBASIC13.16□□□□□ -0.3
IFNA1P01562 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFNA1P01562 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFNA1P01562 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IFNA1P01562 PRAL-201ENST00000624952 3286 ntBASIC13.16□□□□□ -0.3
IFNA1P01562 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IFNA1P01562 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.16□□□□□ -0.3
IFNA1P01562 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.16□□□□□ -0.3
IFNA1P01562 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFNA1P01562 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFNA1P01562 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFNA1P01562 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.16□□□□□ -0.3
IFNA1P01562 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFNA1P01562 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
IFNA1P01562 NUDT16P1-203ENST00000513809 620 ntBASIC13.16□□□□□ -0.3
IFNA1P01562 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFNA1P01562 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC13.16□□□□□ -0.3
IFNA1P01562 CD177P1-201ENST00000606252 935 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms