Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.35■□□□□ 0.37
BEST1O76090 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST1O76090 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.35■□□□□ 0.37
BEST1O76090 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST1O76090 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST1O76090 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.35■□□□□ 0.37
BEST1O76090 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
BEST1O76090 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BEST1O76090 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BEST1O76090 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.35■□□□□ 0.37
BEST1O76090 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST1O76090 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
BEST1O76090 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST1O76090 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST1O76090 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST1O76090 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
BEST1O76090 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST1O76090 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
BEST1O76090 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.35■□□□□ 0.37
BEST1O76090 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.35■□□□□ 0.37
BEST1O76090 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.35■□□□□ 0.37
BEST1O76090 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.35■□□□□ 0.37
BEST1O76090 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.35■□□□□ 0.37
BEST1O76090 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.35■□□□□ 0.37
BEST1O76090 AC004449.1-201ENST00000564240 433 ntBASIC17.35■□□□□ 0.37
BEST1O76090 AC027796.2-201ENST00000575326 344 ntBASIC17.35■□□□□ 0.37
BEST1O76090 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.35■□□□□ 0.37
BEST1O76090 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.35■□□□□ 0.37
BEST1O76090 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST1O76090 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BEST1O76090 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.35■□□□□ 0.37
BEST1O76090 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
BEST1O76090 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BEST1O76090 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
BEST1O76090 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.35■□□□□ 0.37
BEST1O76090 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST1O76090 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
BEST1O76090 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BEST1O76090 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST1O76090 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BEST1O76090 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
BEST1O76090 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.35■□□□□ 0.37
BEST1O76090 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.35■□□□□ 0.37
BEST1O76090 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
BEST1O76090 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BEST1O76090 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.34■□□□□ 0.37
BEST1O76090 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BEST1O76090 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BEST1O76090 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BEST1O76090 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
BEST1O76090 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
BEST1O76090 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
BEST1O76090 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.34■□□□□ 0.37
BEST1O76090 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
BEST1O76090 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.34■□□□□ 0.37
BEST1O76090 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.34■□□□□ 0.37
BEST1O76090 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.34■□□□□ 0.37
BEST1O76090 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
BEST1O76090 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.34■□□□□ 0.37
BEST1O76090 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.34■□□□□ 0.37
BEST1O76090 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BEST1O76090 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.34■□□□□ 0.37
BEST1O76090 ALG1L8P-201ENST00000533887 760 ntBASIC17.34■□□□□ 0.37
BEST1O76090 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.34■□□□□ 0.37
BEST1O76090 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.34■□□□□ 0.37
BEST1O76090 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.34■□□□□ 0.37
BEST1O76090 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BEST1O76090 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BEST1O76090 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
BEST1O76090 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.33■□□□□ 0.37
BEST1O76090 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.33■□□□□ 0.37
BEST1O76090 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BEST1O76090 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
BEST1O76090 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BEST1O76090 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BEST1O76090 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
BEST1O76090 AP3S2-216ENST00000617003 1561 ntBASIC17.33■□□□□ 0.37
BEST1O76090 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
BEST1O76090 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
BEST1O76090 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.33■□□□□ 0.36
BEST1O76090 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST1O76090 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.33■□□□□ 0.36
BEST1O76090 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
BEST1O76090 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST1O76090 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BEST1O76090 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST1O76090 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.33■□□□□ 0.36
BEST1O76090 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.33■□□□□ 0.36
BEST1O76090 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.33■□□□□ 0.36
BEST1O76090 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
BEST1O76090 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.33■□□□□ 0.36
BEST1O76090 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.33■□□□□ 0.36
BEST1O76090 AP001059.3-201ENST00000619053 235 ntBASIC17.33■□□□□ 0.36
BEST1O76090 Z92544.3-201ENST00000624747 417 ntBASIC17.33■□□□□ 0.36
BEST1O76090 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST1O76090 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST1O76090 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST1O76090 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST1O76090 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST1O76090 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms