Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CYTIPO60759 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CYTIPO60759 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CYTIPO60759 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CYTIPO60759 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CYTIPO60759 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CYTIPO60759 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
CYTIPO60759 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CYTIPO60759 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.83□□□□□ -0.04
CYTIPO60759 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CYTIPO60759 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.83□□□□□ -0.04
CYTIPO60759 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CYTIPO60759 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CYTIPO60759 WASH6P-202ENST00000359512 1437 ntBASIC14.83□□□□□ -0.04
CYTIPO60759 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CYTIPO60759 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CYTIPO60759 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CYTIPO60759 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CYTIPO60759 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CYTIPO60759 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CYTIPO60759 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CYTIPO60759 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
CYTIPO60759 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CYTIPO60759 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CYTIPO60759 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CYTIPO60759 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CYTIPO60759 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
CYTIPO60759 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CYTIPO60759 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CYTIPO60759 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CYTIPO60759 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.82□□□□□ -0.04
CYTIPO60759 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CYTIPO60759 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CYTIPO60759 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CYTIPO60759 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CYTIPO60759 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CYTIPO60759 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.82□□□□□ -0.04
CYTIPO60759 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.82□□□□□ -0.04
CYTIPO60759 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CYTIPO60759 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CYTIPO60759 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CYTIPO60759 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CYTIPO60759 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.82□□□□□ -0.04
CYTIPO60759 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.82□□□□□ -0.04
CYTIPO60759 AL671277.1-201ENST00000429656 993 ntBASIC14.82□□□□□ -0.04
CYTIPO60759 ADH5P3-201ENST00000433842 1137 ntBASIC14.82□□□□□ -0.04
CYTIPO60759 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.82□□□□□ -0.04
CYTIPO60759 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.82□□□□□ -0.04
CYTIPO60759 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.82□□□□□ -0.04
CYTIPO60759 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CYTIPO60759 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.82□□□□□ -0.04
CYTIPO60759 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CYTIPO60759 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CYTIPO60759 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CYTIPO60759 AKAP8P1-201ENST00000434743 1349 ntBASIC14.82□□□□□ -0.04
CYTIPO60759 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CYTIPO60759 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CYTIPO60759 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CYTIPO60759 HLA-A-202ENST00000376806 1854 ntBASIC14.82□□□□□ -0.04
CYTIPO60759 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CYTIPO60759 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CYTIPO60759 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CYTIPO60759 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.82□□□□□ -0.04
CYTIPO60759 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CYTIPO60759 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CYTIPO60759 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.81□□□□□ -0.04
CYTIPO60759 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CYTIPO60759 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CYTIPO60759 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CYTIPO60759 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.81□□□□□ -0.04
CYTIPO60759 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CYTIPO60759 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CYTIPO60759 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CYTIPO60759 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CYTIPO60759 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CYTIPO60759 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CYTIPO60759 AC211486.1-202ENST00000416371 468 ntBASIC14.81□□□□□ -0.04
CYTIPO60759 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.81□□□□□ -0.04
CYTIPO60759 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.81□□□□□ -0.04
CYTIPO60759 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.81□□□□□ -0.04
CYTIPO60759 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CYTIPO60759 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.81□□□□□ -0.04
CYTIPO60759 AC211476.1-201ENST00000503899 468 ntBASIC14.81□□□□□ -0.04
CYTIPO60759 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.81□□□□□ -0.04
CYTIPO60759 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.81□□□□□ -0.04
CYTIPO60759 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.81□□□□□ -0.04
CYTIPO60759 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.81□□□□□ -0.04
CYTIPO60759 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CYTIPO60759 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CYTIPO60759 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CYTIPO60759 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
CYTIPO60759 PCDHA12-202ENST00000613593 2588 ntBASIC14.81□□□□□ -0.04
CYTIPO60759 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CYTIPO60759 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CYTIPO60759 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CYTIPO60759 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CYTIPO60759 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CYTIPO60759 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CYTIPO60759 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CYTIPO60759 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms