Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.35□□□□□ -0.27
UPK2O00526 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.34□□□□□ -0.27
UPK2O00526 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.34□□□□□ -0.27
UPK2O00526 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.34□□□□□ -0.27
UPK2O00526 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.34□□□□□ -0.27
UPK2O00526 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.34□□□□□ -0.27
UPK2O00526 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.34□□□□□ -0.27
UPK2O00526 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.34□□□□□ -0.27
UPK2O00526 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.34□□□□□ -0.27
UPK2O00526 AC073621.1-201ENST00000392730 636 ntBASIC13.34□□□□□ -0.27
UPK2O00526 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.34□□□□□ -0.27
UPK2O00526 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
UPK2O00526 RPS2P1-201ENST00000434010 821 ntBASIC13.34□□□□□ -0.27
UPK2O00526 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.34□□□□□ -0.27
UPK2O00526 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.34□□□□□ -0.27
UPK2O00526 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.34□□□□□ -0.27
UPK2O00526 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.34□□□□□ -0.27
UPK2O00526 AC073648.2-201ENST00000510116 352 ntBASIC13.34□□□□□ -0.27
UPK2O00526 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.34□□□□□ -0.27
UPK2O00526 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.34□□□□□ -0.27
UPK2O00526 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
UPK2O00526 AC008667.4-201ENST00000607370 168 ntBASIC13.34□□□□□ -0.27
UPK2O00526 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.34□□□□□ -0.27
UPK2O00526 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.34□□□□□ -0.27
UPK2O00526 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
UPK2O00526 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.34□□□□□ -0.27
UPK2O00526 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.34□□□□□ -0.27
UPK2O00526 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.34□□□□□ -0.27
UPK2O00526 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
UPK2O00526 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.34□□□□□ -0.27
UPK2O00526 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.34□□□□□ -0.27
UPK2O00526 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.34□□□□□ -0.27
UPK2O00526 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
UPK2O00526 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UPK2O00526 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
UPK2O00526 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
UPK2O00526 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
UPK2O00526 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.33□□□□□ -0.27
UPK2O00526 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
UPK2O00526 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
UPK2O00526 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
UPK2O00526 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
UPK2O00526 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
UPK2O00526 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.33□□□□□ -0.28
UPK2O00526 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.33□□□□□ -0.28
UPK2O00526 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.33□□□□□ -0.28
UPK2O00526 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK2O00526 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UPK2O00526 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
UPK2O00526 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK2O00526 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK2O00526 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UPK2O00526 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
UPK2O00526 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK2O00526 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
UPK2O00526 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK2O00526 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.33□□□□□ -0.28
UPK2O00526 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.33□□□□□ -0.28
UPK2O00526 IFNL4P1-201ENST00000607083 540 ntBASIC13.33□□□□□ -0.28
UPK2O00526 AC020765.3-201ENST00000613051 740 ntBASIC13.33□□□□□ -0.28
UPK2O00526 AC010654.1-201ENST00000615722 808 ntBASIC13.33□□□□□ -0.28
UPK2O00526 MIR1199-201ENST00000621445 119 ntBASIC13.33□□□□□ -0.28
UPK2O00526 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.33□□□□□ -0.28
UPK2O00526 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.33□□□□□ -0.28
UPK2O00526 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK2O00526 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK2O00526 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UPK2O00526 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.33□□□□□ -0.28
UPK2O00526 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UPK2O00526 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.33□□□□□ -0.28
UPK2O00526 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK2O00526 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UPK2O00526 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms