Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC7O00311 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDC7O00311 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CDC7O00311 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDC7O00311 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.3■□□□□ 0.2
CDC7O00311 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 HLA-A-201ENST00000376802 1334 ntBASIC16.3■□□□□ 0.2
CDC7O00311 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.3■□□□□ 0.2
CDC7O00311 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.3■□□□□ 0.2
CDC7O00311 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.3■□□□□ 0.2
CDC7O00311 VN2R19P-201ENST00000442399 1052 ntBASIC16.3■□□□□ 0.2
CDC7O00311 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.3■□□□□ 0.2
CDC7O00311 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.3■□□□□ 0.2
CDC7O00311 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CDC7O00311 IGHV3-22-201ENST00000520721 359 ntBASIC16.3■□□□□ 0.2
CDC7O00311 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.3■□□□□ 0.2
CDC7O00311 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CDC7O00311 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 MIR4515-201ENST00000584082 81 ntBASIC16.3■□□□□ 0.2
CDC7O00311 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.3■□□□□ 0.2
CDC7O00311 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CDC7O00311 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDC7O00311 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC7O00311 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC7O00311 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC7O00311 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDC7O00311 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC7O00311 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC7O00311 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDC7O00311 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC7O00311 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC7O00311 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC7O00311 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDC7O00311 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDC7O00311 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC7O00311 HMGA1P7-201ENST00000406908 502 ntBASIC16.29■□□□□ 0.2
CDC7O00311 AC093909.1-201ENST00000504731 1122 ntBASIC16.29■□□□□ 0.2
CDC7O00311 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC7O00311 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.29■□□□□ 0.2
CDC7O00311 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC7O00311 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC7O00311 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC7O00311 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC7O00311 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC7O00311 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDC7O00311 AL596087.1-201ENST00000400979 1969 ntBASIC16.29■□□□□ 0.2
CDC7O00311 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC7O00311 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CDC7O00311 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
CDC7O00311 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.29■□□□□ 0.2
CDC7O00311 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC7O00311 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC7O00311 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDC7O00311 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
CDC7O00311 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.28■□□□□ 0.2
CDC7O00311 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDC7O00311 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC7O00311 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.28■□□□□ 0.2
CDC7O00311 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC7O00311 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC7O00311 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDC7O00311 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDC7O00311 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
CDC7O00311 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDC7O00311 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.28■□□□□ 0.2
CDC7O00311 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDC7O00311 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDC7O00311 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.28■□□□□ 0.2
CDC7O00311 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.28■□□□□ 0.2
CDC7O00311 TPM4P1-201ENST00000436100 807 ntBASIC16.28■□□□□ 0.2
CDC7O00311 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.28■□□□□ 0.2
CDC7O00311 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.28■□□□□ 0.2
CDC7O00311 AL513480.1-201ENST00000451731 511 ntBASIC16.28■□□□□ 0.2
CDC7O00311 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.28■□□□□ 0.2
CDC7O00311 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.28■□□□□ 0.2
CDC7O00311 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.28■□□□□ 0.2
CDC7O00311 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms