Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.68■□□□□ 0.26
TRIM49D1C9J1S8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM49D1C9J1S8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM49D1C9J1S8 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM49D1C9J1S8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRIM49D1C9J1S8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM49D1C9J1S8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM49D1C9J1S8 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM49D1C9J1S8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM49D1C9J1S8 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM49D1C9J1S8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 PCGF3-213ENST00000620529 1899 ntBASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 AC092384.3-202ENST00000564646 2873 ntBASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 AC087388.1-201ENST00000571370 1112 ntBASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 AC138894.3-201ENST00000603787 634 ntBASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 REXO1L3P-201ENST00000622202 1288 ntBASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TRIM49D1C9J1S8 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 KRT16P4-201ENST00000453883 522 ntBASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 AC087163.2-201ENST00000457299 853 ntBASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 AC106795.1-205ENST00000512851 1056 ntBASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 AC092119.3-201ENST00000612618 583 ntBASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 AC131009.4-201ENST00000624048 1740 ntBASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 GPAA1P2-202ENST00000606848 1787 ntBASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM49D1C9J1S8 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM49D1C9J1S8 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms