Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 AC004461.1-201ENST00000412461 403 ntBASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 HCG4-201ENST00000418983 998 ntBASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 AL096865.1-201ENST00000606796 927 ntBASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 AP001350.2-201ENST00000625104 1094 ntBASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 AC092902.6-201ENST00000641783 218 ntBASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 AC131009.4-201ENST00000624048 1740 ntBASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PCDHB11Q9Y5F2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 LINC00895-201ENST00000629028 1637 ntBASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 AC002056.1-201ENST00000395613 760 ntBASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 AC023141.5-201ENST00000458585 616 ntBASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 HLA-J-203ENST00000494367 1087 ntBASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 AC087641.1-201ENST00000557561 1021 ntBASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 MIR4515-201ENST00000584082 81 ntBASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 AC013467.2-201ENST00000605472 835 ntBASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 AL645728.2-201ENST00000641974 660 ntBASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHB11Q9Y5F2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
PCDHB11Q9Y5F2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDHB11Q9Y5F2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
PCDHB11Q9Y5F2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB11Q9Y5F2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB11Q9Y5F2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB11Q9Y5F2 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
PCDHB11Q9Y5F2 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB11Q9Y5F2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PCDHB11Q9Y5F2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PCDHB11Q9Y5F2 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDHB11Q9Y5F2 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 AL603756.1-201ENST00000606511 2163 ntBASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 AL139400.1-201ENST00000366220 510 ntBASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PCDHB11Q9Y5F2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms