Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHA4Q9UN74 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PCDHA4Q9UN74 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 CEND1P1-201ENST00000451006 455 ntBASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 MIR4469-201ENST00000583919 79 ntBASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 AC026120.1-201ENST00000611536 926 ntBASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 AC073439.1-201ENST00000624121 1774 ntBASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHA4Q9UN74 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 AC124067.4-201ENST00000519691 2379 ntBASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 PCDHB19P-201ENST00000570871 2371 ntBASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 RN7SL589P-201ENST00000481268 310 ntBASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 KRT8P48-201ENST00000515599 1220 ntBASIC18.9■□□□□ 0.62
PCDHA4Q9UN74 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms