Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 REXO1L9P-201ENST00000604264 2108 ntBASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 AGER-206ENST00000375070 1463 ntTSL 5 BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
RIMBP3Q9UFD9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RIMBP3Q9UFD9 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RIMBP3Q9UFD9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC25.72■■□□□ 1.71
RIMBP3Q9UFD9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RIMBP3Q9UFD9 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
RIMBP3Q9UFD9 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
RIMBP3Q9UFD9 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RIMBP3Q9UFD9 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC25.72■■□□□ 1.71
RIMBP3Q9UFD9 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
RIMBP3Q9UFD9 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RIMBP3Q9UFD9 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC25.72■■□□□ 1.71
RIMBP3Q9UFD9 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC25.72■■□□□ 1.71
RIMBP3Q9UFD9 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC25.72■■□□□ 1.71
RIMBP3Q9UFD9 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC25.72■■□□□ 1.71
RIMBP3Q9UFD9 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC25.72■■□□□ 1.71
RIMBP3Q9UFD9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
RIMBP3Q9UFD9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC25.72■■□□□ 1.71
RIMBP3Q9UFD9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC25.72■■□□□ 1.71
RIMBP3Q9UFD9 AC108860.2-201ENST00000562760 2183 ntBASIC25.72■■□□□ 1.71
RIMBP3Q9UFD9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RIMBP3Q9UFD9 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RIMBP3Q9UFD9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RIMBP3Q9UFD9 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RIMBP3Q9UFD9 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RIMBP3Q9UFD9 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RIMBP3Q9UFD9 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
RIMBP3Q9UFD9 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC25.71■■□□□ 1.71
RIMBP3Q9UFD9 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC25.71■■□□□ 1.71
RIMBP3Q9UFD9 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC25.71■■□□□ 1.71
RIMBP3Q9UFD9 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC25.71■■□□□ 1.71
RIMBP3Q9UFD9 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC25.71■■□□□ 1.71
RIMBP3Q9UFD9 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RIMBP3Q9UFD9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
RIMBP3Q9UFD9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC25.71■■□□□ 1.71
RIMBP3Q9UFD9 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC25.71■■□□□ 1.71
RIMBP3Q9UFD9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RIMBP3Q9UFD9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
RIMBP3Q9UFD9 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC25.7■■□□□ 1.71
RIMBP3Q9UFD9 AL671710.1-201ENST00000610245 2349 ntBASIC25.7■■□□□ 1.71
RIMBP3Q9UFD9 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.71
RIMBP3Q9UFD9 AC074338.1-201ENST00000416825 156 ntBASIC25.7■■□□□ 1.71
RIMBP3Q9UFD9 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
RIMBP3Q9UFD9 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
RIMBP3Q9UFD9 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
RIMBP3Q9UFD9 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.71
RIMBP3Q9UFD9 PLS3-210ENST00000626746 216 ntTSL 4 BASIC25.7■■□□□ 1.71
RIMBP3Q9UFD9 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RIMBP3Q9UFD9 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC25.7■■□□□ 1.7
RIMBP3Q9UFD9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RIMBP3Q9UFD9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
RIMBP3Q9UFD9 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC25.7■■□□□ 1.7
RIMBP3Q9UFD9 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.7
RIMBP3Q9UFD9 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC25.7■■□□□ 1.7
RIMBP3Q9UFD9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RIMBP3Q9UFD9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RIMBP3Q9UFD9 AC025271.4-201ENST00000621477 1726 ntBASIC25.7■■□□□ 1.7
RIMBP3Q9UFD9 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC25.7■■□□□ 1.7
RIMBP3Q9UFD9 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC25.7■■□□□ 1.7
RIMBP3Q9UFD9 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RIMBP3Q9UFD9 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC25.7■■□□□ 1.7
RIMBP3Q9UFD9 CEP164P1-201ENST00000455142 418 ntBASIC25.7■■□□□ 1.7
RIMBP3Q9UFD9 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC25.7■■□□□ 1.7
RIMBP3Q9UFD9 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RIMBP3Q9UFD9 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC25.7■■□□□ 1.7
RIMBP3Q9UFD9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RIMBP3Q9UFD9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC25.7■■□□□ 1.7
RIMBP3Q9UFD9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RIMBP3Q9UFD9 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RIMBP3Q9UFD9 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RIMBP3Q9UFD9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
RIMBP3Q9UFD9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RIMBP3Q9UFD9 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RIMBP3Q9UFD9 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RIMBP3Q9UFD9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC25.69■■□□□ 1.7
RIMBP3Q9UFD9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC25.69■■□□□ 1.7
RIMBP3Q9UFD9 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RIMBP3Q9UFD9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RIMBP3Q9UFD9 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RIMBP3Q9UFD9 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RIMBP3Q9UFD9 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RIMBP3Q9UFD9 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RIMBP3Q9UFD9 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RIMBP3Q9UFD9 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC25.69■■□□□ 1.7
RIMBP3Q9UFD9 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RIMBP3Q9UFD9 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC25.69■■□□□ 1.7
RIMBP3Q9UFD9 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC25.69■■□□□ 1.7
RIMBP3Q9UFD9 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC25.69■■□□□ 1.7
RIMBP3Q9UFD9 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RIMBP3Q9UFD9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC25.69■■□□□ 1.7
RIMBP3Q9UFD9 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC25.69■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms