Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
CDC42SE1Q9NRR8 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 AL365181.3-201ENST00000605886 3222 ntBASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 MST1P2-201ENST00000457982 2291 ntBASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 SRGAP3-202ENST00000383836 8656 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 AC092053.1-201ENST00000605787 1936 ntBASIC8.41□□□□□ -1.06
CDC42SE1Q9NRR8 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CDC42SE1Q9NRR8 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms