Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.01■□□□□ 0.31
ATP13A1Q9HD20 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ATP13A1Q9HD20 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP13A1Q9HD20 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ATP13A1Q9HD20 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATP13A1Q9HD20 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATP13A1Q9HD20 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP13A1Q9HD20 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP13A1Q9HD20 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP13A1Q9HD20 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ATP13A1Q9HD20 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP13A1Q9HD20 DNAJB3-202ENST00000449667 1266 ntBASIC17■□□□□ 0.31
ATP13A1Q9HD20 SPDYE11-202ENST00000450699 704 ntBASIC17■□□□□ 0.31
ATP13A1Q9HD20 RN7SL589P-201ENST00000481268 310 ntBASIC17■□□□□ 0.31
ATP13A1Q9HD20 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17■□□□□ 0.31
ATP13A1Q9HD20 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATP13A1Q9HD20 AL135744.1-201ENST00000565098 629 ntBASIC17■□□□□ 0.31
ATP13A1Q9HD20 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ATP13A1Q9HD20 SPDYE9P-201ENST00000570642 692 ntBASIC17■□□□□ 0.31
ATP13A1Q9HD20 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17■□□□□ 0.31
ATP13A1Q9HD20 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17■□□□□ 0.31
ATP13A1Q9HD20 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17■□□□□ 0.31
ATP13A1Q9HD20 AL596442.2-201ENST00000610240 980 ntBASIC17■□□□□ 0.31
ATP13A1Q9HD20 SPDYE10P-202ENST00000612005 668 ntBASIC17■□□□□ 0.31
ATP13A1Q9HD20 SPDYE8P-202ENST00000612377 668 ntBASIC17■□□□□ 0.31
ATP13A1Q9HD20 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17■□□□□ 0.31
ATP13A1Q9HD20 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17■□□□□ 0.31
ATP13A1Q9HD20 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP13A1Q9HD20 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17■□□□□ 0.31
ATP13A1Q9HD20 PCDHA14-201ENST00000506751 2298 ntBASIC17■□□□□ 0.31
ATP13A1Q9HD20 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ATP13A1Q9HD20 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP13A1Q9HD20 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17■□□□□ 0.31
ATP13A1Q9HD20 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ATP13A1Q9HD20 AL118508.1-201ENST00000613502 2345 ntBASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 AKAP8P1-201ENST00000434743 1349 ntBASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 SNHG9-202ENST00000564014 471 ntBASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ATP13A1Q9HD20 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ATP13A1Q9HD20 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ATP13A1Q9HD20 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP13A1Q9HD20 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.98■□□□□ 0.31
ATP13A1Q9HD20 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
ATP13A1Q9HD20 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ATP13A1Q9HD20 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.98■□□□□ 0.31
ATP13A1Q9HD20 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ATP13A1Q9HD20 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ATP13A1Q9HD20 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
ATP13A1Q9HD20 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ATP13A1Q9HD20 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms