Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 KRT18P58-201ENST00000527480 1120 ntBASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 AC013467.2-201ENST00000605472 835 ntBASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 AC008667.4-201ENST00000607370 168 ntBASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 GGTLC5P-201ENST00000617623 998 ntBASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 AC005593.1-201ENST00000624894 515 ntBASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.69■□□□□ 0.1
YIPF4Q9BSR8 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 SLC22A20-204ENST00000530038 1673 ntBASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 MIR574-201ENST00000385209 96 ntBASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 IGHV3-65-201ENST00000523210 341 ntBASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 AC107918.2-201ENST00000530817 355 ntBASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 AC004790.2-201ENST00000623588 572 ntBASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 AC131009.4-201ENST00000624048 1740 ntBASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
YIPF4Q9BSR8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 SNX33P1-201ENST00000592116 1762 ntBASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
YIPF4Q9BSR8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms