Protein–RNA interactions for Protein: Q96QF7

GCNA, Acidic repeat-containing protein, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNAQ96QF7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GCNAQ96QF7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.52■□□□□ 0.4
GCNAQ96QF7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.52■□□□□ 0.4
GCNAQ96QF7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GCNAQ96QF7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
GCNAQ96QF7 LINC02084-201ENST00000606069 1096 ntBASIC17.52■□□□□ 0.4
GCNAQ96QF7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
GCNAQ96QF7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.52■□□□□ 0.4
GCNAQ96QF7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
GCNAQ96QF7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
GCNAQ96QF7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
GCNAQ96QF7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
GCNAQ96QF7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.52■□□□□ 0.39
GCNAQ96QF7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
GCNAQ96QF7 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.52■□□□□ 0.39
GCNAQ96QF7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GCNAQ96QF7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
GCNAQ96QF7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GCNAQ96QF7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
GCNAQ96QF7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
GCNAQ96QF7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
GCNAQ96QF7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
GCNAQ96QF7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.51■□□□□ 0.39
GCNAQ96QF7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.51■□□□□ 0.39
GCNAQ96QF7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GCNAQ96QF7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.51■□□□□ 0.39
GCNAQ96QF7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GCNAQ96QF7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GCNAQ96QF7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
GCNAQ96QF7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GCNAQ96QF7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.51■□□□□ 0.39
GCNAQ96QF7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GCNAQ96QF7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
GCNAQ96QF7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
GCNAQ96QF7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GCNAQ96QF7 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
GCNAQ96QF7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.51■□□□□ 0.39
GCNAQ96QF7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GCNAQ96QF7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.51■□□□□ 0.39
GCNAQ96QF7 SPDYE7P-202ENST00000420373 878 ntBASIC17.51■□□□□ 0.39
GCNAQ96QF7 FAM58DP-201ENST00000428076 619 ntBASIC17.51■□□□□ 0.39
GCNAQ96QF7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GCNAQ96QF7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.51■□□□□ 0.39
GCNAQ96QF7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
GCNAQ96QF7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.51■□□□□ 0.39
GCNAQ96QF7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.51■□□□□ 0.39
GCNAQ96QF7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.51■□□□□ 0.39
GCNAQ96QF7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.51■□□□□ 0.39
GCNAQ96QF7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.51■□□□□ 0.39
GCNAQ96QF7 AL118508.1-201ENST00000613502 2345 ntBASIC17.51■□□□□ 0.39
GCNAQ96QF7 AC008267.7-201ENST00000624570 1194 ntBASIC17.51■□□□□ 0.39
GCNAQ96QF7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.51■□□□□ 0.39
GCNAQ96QF7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
GCNAQ96QF7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GCNAQ96QF7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
GCNAQ96QF7 AC011270.2-201ENST00000624293 2550 ntBASIC17.51■□□□□ 0.39
GCNAQ96QF7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
GCNAQ96QF7 AC016027.1-202ENST00000607927 1699 ntBASIC17.51■□□□□ 0.39
GCNAQ96QF7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
GCNAQ96QF7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.51■□□□□ 0.39
GCNAQ96QF7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
GCNAQ96QF7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.5■□□□□ 0.39
GCNAQ96QF7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.5■□□□□ 0.39
GCNAQ96QF7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.5■□□□□ 0.39
GCNAQ96QF7 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.5■□□□□ 0.39
GCNAQ96QF7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.5■□□□□ 0.39
GCNAQ96QF7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
GCNAQ96QF7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
GCNAQ96QF7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.5■□□□□ 0.39
GCNAQ96QF7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GCNAQ96QF7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.5■□□□□ 0.39
GCNAQ96QF7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.5■□□□□ 0.39
GCNAQ96QF7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
GCNAQ96QF7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GCNAQ96QF7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.5■□□□□ 0.39
GCNAQ96QF7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
GCNAQ96QF7 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
GCNAQ96QF7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GCNAQ96QF7 AC125807.1-201ENST00000483097 614 ntBASIC17.5■□□□□ 0.39
GCNAQ96QF7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GCNAQ96QF7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.5■□□□□ 0.39
GCNAQ96QF7 AL512356.2-201ENST00000546955 174 ntBASIC17.5■□□□□ 0.39
GCNAQ96QF7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.5■□□□□ 0.39
GCNAQ96QF7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
GCNAQ96QF7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
GCNAQ96QF7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
GCNAQ96QF7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
GCNAQ96QF7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GCNAQ96QF7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GCNAQ96QF7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
GCNAQ96QF7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GCNAQ96QF7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GCNAQ96QF7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GCNAQ96QF7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
GCNAQ96QF7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GCNAQ96QF7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GCNAQ96QF7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GCNAQ96QF7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
GCNAQ96QF7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GCNAQ96QF7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms