Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 AC011676.5-201ENST00000624864 2660 ntBASIC17.11■□□□□ 0.33
RPRD1AQ96P16 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPRD1AQ96P16 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 AC004461.1-201ENST00000412461 403 ntBASIC17.1■□□□□ 0.33
RPRD1AQ96P16 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 AC243562.1-201ENST00000560672 389 ntBASIC17.1■□□□□ 0.33
RPRD1AQ96P16 AC004835.2-201ENST00000603762 682 ntBASIC17.1■□□□□ 0.33
RPRD1AQ96P16 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 FLJ38576-201ENST00000623820 2459 ntBASIC17.1■□□□□ 0.33
RPRD1AQ96P16 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPRD1AQ96P16 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.09■□□□□ 0.33
RPRD1AQ96P16 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RPRD1AQ96P16 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RPRD1AQ96P16 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.08■□□□□ 0.33
RPRD1AQ96P16 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RPRD1AQ96P16 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RPRD1AQ96P16 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms