Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CHAMP1Q96JM3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHAMP1Q96JM3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHAMP1Q96JM3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHAMP1Q96JM3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHAMP1Q96JM3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHAMP1Q96JM3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.29■□□□□ 0.68
CHAMP1Q96JM3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
CHAMP1Q96JM3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CHAMP1Q96JM3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.29■□□□□ 0.68
CHAMP1Q96JM3 SLC25A6P2-201ENST00000497974 877 ntBASIC19.29■□□□□ 0.68
CHAMP1Q96JM3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CHAMP1Q96JM3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHAMP1Q96JM3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHAMP1Q96JM3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC19.29■□□□□ 0.68
CHAMP1Q96JM3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.29■□□□□ 0.68
CHAMP1Q96JM3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC19.29■□□□□ 0.68
CHAMP1Q96JM3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHAMP1Q96JM3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHAMP1Q96JM3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CHAMP1Q96JM3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHAMP1Q96JM3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CHAMP1Q96JM3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHAMP1Q96JM3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 AC112504.1-201ENST00000623415 1841 ntBASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 AP000347.1-202ENST00000435868 847 ntBASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 AC012615.1-201ENST00000565797 1299 ntBASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHAMP1Q96JM3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
CHAMP1Q96JM3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHAMP1Q96JM3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.27■□□□□ 0.68
CHAMP1Q96JM3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHAMP1Q96JM3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
CHAMP1Q96JM3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CHAMP1Q96JM3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHAMP1Q96JM3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CHAMP1Q96JM3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHAMP1Q96JM3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.27■□□□□ 0.68
CHAMP1Q96JM3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHAMP1Q96JM3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CHAMP1Q96JM3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHAMP1Q96JM3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CHAMP1Q96JM3 AC087163.2-201ENST00000457299 853 ntBASIC19.27■□□□□ 0.68
CHAMP1Q96JM3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
CHAMP1Q96JM3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.27■□□□□ 0.68
CHAMP1Q96JM3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.27■□□□□ 0.68
CHAMP1Q96JM3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.27■□□□□ 0.68
CHAMP1Q96JM3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHAMP1Q96JM3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.27■□□□□ 0.68
CHAMP1Q96JM3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.27■□□□□ 0.67
CHAMP1Q96JM3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.27■□□□□ 0.67
CHAMP1Q96JM3 AP005117.1-202ENST00000581724 1908 ntBASIC19.27■□□□□ 0.67
CHAMP1Q96JM3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHAMP1Q96JM3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.27■□□□□ 0.67
CHAMP1Q96JM3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.27■□□□□ 0.67
CHAMP1Q96JM3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 LINC02228-204ENST00000642115 2962 ntBASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 CDC14C-201ENST00000428251 1719 ntBASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.26■□□□□ 0.67
CHAMP1Q96JM3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms