Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
ITCHQ96J02 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ITCHQ96J02 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.89■□□□□ 0.13
ITCHQ96J02 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ITCHQ96J02 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
ITCHQ96J02 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.88■□□□□ 0.13
ITCHQ96J02 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.88■□□□□ 0.13
ITCHQ96J02 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
ITCHQ96J02 AL356309.3-201ENST00000624132 1934 ntBASIC15.88■□□□□ 0.13
ITCHQ96J02 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ITCHQ96J02 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
ITCHQ96J02 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
ITCHQ96J02 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
ITCHQ96J02 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.88■□□□□ 0.13
ITCHQ96J02 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ITCHQ96J02 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ITCHQ96J02 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ITCHQ96J02 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ITCHQ96J02 RBM17P3-201ENST00000417687 1192 ntBASIC15.88■□□□□ 0.13
ITCHQ96J02 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.88■□□□□ 0.13
ITCHQ96J02 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ITCHQ96J02 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.88■□□□□ 0.13
ITCHQ96J02 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ITCHQ96J02 MIR4492-201ENST00000581627 80 ntBASIC15.88■□□□□ 0.13
ITCHQ96J02 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.88■□□□□ 0.13
ITCHQ96J02 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.88■□□□□ 0.13
ITCHQ96J02 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
ITCHQ96J02 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
ITCHQ96J02 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ITCHQ96J02 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.88■□□□□ 0.13
ITCHQ96J02 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ITCHQ96J02 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.88■□□□□ 0.13
ITCHQ96J02 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.88■□□□□ 0.13
ITCHQ96J02 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
ITCHQ96J02 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
ITCHQ96J02 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
ITCHQ96J02 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
ITCHQ96J02 AC105917.1-201ENST00000506637 2539 ntBASIC15.88■□□□□ 0.13
ITCHQ96J02 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.87■□□□□ 0.13
ITCHQ96J02 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
ITCHQ96J02 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.87■□□□□ 0.13
ITCHQ96J02 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
ITCHQ96J02 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.87■□□□□ 0.13
ITCHQ96J02 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.87■□□□□ 0.13
ITCHQ96J02 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.87■□□□□ 0.13
ITCHQ96J02 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.87■□□□□ 0.13
ITCHQ96J02 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.87■□□□□ 0.13
ITCHQ96J02 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.87■□□□□ 0.13
ITCHQ96J02 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.87■□□□□ 0.13
ITCHQ96J02 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.87■□□□□ 0.13
ITCHQ96J02 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.87■□□□□ 0.13
ITCHQ96J02 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.87■□□□□ 0.13
ITCHQ96J02 AL358472.4-201ENST00000633140 710 ntBASIC15.87■□□□□ 0.13
ITCHQ96J02 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.87■□□□□ 0.13
ITCHQ96J02 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.87■□□□□ 0.13
ITCHQ96J02 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.87■□□□□ 0.13
ITCHQ96J02 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.87■□□□□ 0.13
ITCHQ96J02 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
ITCHQ96J02 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 AL031731.1-201ENST00000642131 2094 ntBASIC15.87■□□□□ 0.13
ITCHQ96J02 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
ITCHQ96J02 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
ITCHQ96J02 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
ITCHQ96J02 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ITCHQ96J02 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.86■□□□□ 0.13
ITCHQ96J02 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ITCHQ96J02 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ITCHQ96J02 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.86■□□□□ 0.13
ITCHQ96J02 GGT4P-201ENST00000623672 1708 ntBASIC15.86■□□□□ 0.13
ITCHQ96J02 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
ITCHQ96J02 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ITCHQ96J02 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
ITCHQ96J02 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.86■□□□□ 0.13
ITCHQ96J02 FAM210CP-201ENST00000445714 574 ntBASIC15.86■□□□□ 0.13
ITCHQ96J02 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.86■□□□□ 0.13
ITCHQ96J02 AC139887.3-201ENST00000568585 713 ntBASIC15.86■□□□□ 0.13
ITCHQ96J02 AC091167.2-201ENST00000579581 588 ntBASIC15.86■□□□□ 0.13
ITCHQ96J02 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms