Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 RHOQP3-201ENST00000437982 621 ntBASIC17.11■□□□□ 0.33
HDAC11Q96DB2 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.11■□□□□ 0.33
HDAC11Q96DB2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 AC010507.1-201ENST00000633895 436 ntBASIC17.11■□□□□ 0.33
HDAC11Q96DB2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.11■□□□□ 0.33
HDAC11Q96DB2 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 AL513480.1-201ENST00000451731 511 ntBASIC17.1■□□□□ 0.33
HDAC11Q96DB2 RPL13AP23-201ENST00000480739 586 ntBASIC17.1■□□□□ 0.33
HDAC11Q96DB2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 AL031432.2-201ENST00000566714 459 ntBASIC17.1■□□□□ 0.33
HDAC11Q96DB2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 AL928711.1-201ENST00000570165 459 ntBASIC17.1■□□□□ 0.33
HDAC11Q96DB2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 BX640515.1-201ENST00000617215 977 ntBASIC17.1■□□□□ 0.33
HDAC11Q96DB2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HDAC11Q96DB2 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 ME2P1-201ENST00000426028 1970 ntBASIC17.09■□□□□ 0.33
HDAC11Q96DB2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HDAC11Q96DB2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms