Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ATP2A3Q93084 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.52■□□□□ 0.39
ATP2A3Q93084 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
ATP2A3Q93084 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ATP2A3Q93084 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATP2A3Q93084 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATP2A3Q93084 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATP2A3Q93084 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATP2A3Q93084 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATP2A3Q93084 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ATP2A3Q93084 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
ATP2A3Q93084 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.52■□□□□ 0.39
ATP2A3Q93084 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.52■□□□□ 0.39
ATP2A3Q93084 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A3Q93084 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP2A3Q93084 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ATP2A3Q93084 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A3Q93084 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ATP2A3Q93084 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.51■□□□□ 0.39
ATP2A3Q93084 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A3Q93084 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A3Q93084 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A3Q93084 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A3Q93084 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A3Q93084 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.51■□□□□ 0.39
ATP2A3Q93084 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP2A3Q93084 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP2A3Q93084 RN7SL589P-201ENST00000481268 310 ntBASIC17.51■□□□□ 0.39
ATP2A3Q93084 HLA-J-203ENST00000494367 1087 ntBASIC17.51■□□□□ 0.39
ATP2A3Q93084 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.51■□□□□ 0.39
ATP2A3Q93084 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.51■□□□□ 0.39
ATP2A3Q93084 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP2A3Q93084 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
ATP2A3Q93084 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A3Q93084 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.51■□□□□ 0.39
ATP2A3Q93084 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.51■□□□□ 0.39
ATP2A3Q93084 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.51■□□□□ 0.39
ATP2A3Q93084 AC099522.2-201ENST00000607001 744 ntBASIC17.51■□□□□ 0.39
ATP2A3Q93084 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
ATP2A3Q93084 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
ATP2A3Q93084 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.51■□□□□ 0.39
ATP2A3Q93084 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A3Q93084 AC116353.5-201ENST00000638148 1699 ntBASIC17.51■□□□□ 0.39
ATP2A3Q93084 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.51■□□□□ 0.39
ATP2A3Q93084 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A3Q93084 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
ATP2A3Q93084 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A3Q93084 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ATP2A3Q93084 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A3Q93084 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.5■□□□□ 0.39
ATP2A3Q93084 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A3Q93084 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A3Q93084 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A3Q93084 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A3Q93084 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A3Q93084 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A3Q93084 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
ATP2A3Q93084 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
ATP2A3Q93084 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A3Q93084 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A3Q93084 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A3Q93084 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A3Q93084 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.5■□□□□ 0.39
ATP2A3Q93084 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ATP2A3Q93084 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A3Q93084 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ATP2A3Q93084 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A3Q93084 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.5■□□□□ 0.39
ATP2A3Q93084 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.5■□□□□ 0.39
ATP2A3Q93084 AL671277.1-201ENST00000429656 993 ntBASIC17.5■□□□□ 0.39
ATP2A3Q93084 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.5■□□□□ 0.39
ATP2A3Q93084 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.5■□□□□ 0.39
ATP2A3Q93084 SPDYE11-202ENST00000450699 704 ntBASIC17.5■□□□□ 0.39
ATP2A3Q93084 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.5■□□□□ 0.39
ATP2A3Q93084 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.5■□□□□ 0.39
ATP2A3Q93084 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.5■□□□□ 0.39
ATP2A3Q93084 SPDYE9P-201ENST00000570642 692 ntBASIC17.5■□□□□ 0.39
ATP2A3Q93084 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A3Q93084 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A3Q93084 LINC02084-201ENST00000606069 1096 ntBASIC17.5■□□□□ 0.39
ATP2A3Q93084 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A3Q93084 SPDYE10P-202ENST00000612005 668 ntBASIC17.5■□□□□ 0.39
ATP2A3Q93084 SPDYE8P-202ENST00000612377 668 ntBASIC17.5■□□□□ 0.39
ATP2A3Q93084 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A3Q93084 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
ATP2A3Q93084 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.5■□□□□ 0.39
ATP2A3Q93084 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.5■□□□□ 0.39
ATP2A3Q93084 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A3Q93084 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ATP2A3Q93084 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A3Q93084 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A3Q93084 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ATP2A3Q93084 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
ATP2A3Q93084 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A3Q93084 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.49■□□□□ 0.39
ATP2A3Q93084 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A3Q93084 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ATP2A3Q93084 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A3Q93084 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ATP2A3Q93084 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms