Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS1Q92902 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS1Q92902 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.31■□□□□ 0.04
HPS1Q92902 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
HPS1Q92902 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.31■□□□□ 0.04
HPS1Q92902 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HPS1Q92902 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS1Q92902 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS1Q92902 AC067930.6-201ENST00000623257 4947 ntBASIC15.31■□□□□ 0.04
HPS1Q92902 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HPS1Q92902 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HPS1Q92902 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS1Q92902 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.31■□□□□ 0.04
HPS1Q92902 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
HPS1Q92902 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS1Q92902 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.31■□□□□ 0.04
HPS1Q92902 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.31■□□□□ 0.04
HPS1Q92902 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS1Q92902 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.31■□□□□ 0.04
HPS1Q92902 AL390728.6-201ENST00000566446 1246 ntBASIC15.31■□□□□ 0.04
HPS1Q92902 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HPS1Q92902 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.31■□□□□ 0.04
HPS1Q92902 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HPS1Q92902 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HPS1Q92902 CICP14-201ENST00000629111 2732 ntBASIC15.31■□□□□ 0.04
HPS1Q92902 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.31■□□□□ 0.04
HPS1Q92902 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.31■□□□□ 0.04
HPS1Q92902 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HPS1Q92902 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.31■□□□□ 0.04
HPS1Q92902 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS1Q92902 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS1Q92902 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.31■□□□□ 0.04
HPS1Q92902 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS1Q92902 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.31■□□□□ 0.04
HPS1Q92902 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.31■□□□□ 0.04
HPS1Q92902 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HPS1Q92902 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HPS1Q92902 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS1Q92902 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.31■□□□□ 0.04
HPS1Q92902 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.31■□□□□ 0.04
HPS1Q92902 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HPS1Q92902 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS1Q92902 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HPS1Q92902 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS1Q92902 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS1Q92902 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.3■□□□□ 0.04
HPS1Q92902 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HPS1Q92902 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS1Q92902 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
HPS1Q92902 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS1Q92902 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS1Q92902 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS1Q92902 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS1Q92902 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS1Q92902 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS1Q92902 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS1Q92902 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS1Q92902 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
HPS1Q92902 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.3■□□□□ 0.04
HPS1Q92902 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.3■□□□□ 0.04
HPS1Q92902 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.3■□□□□ 0.04
HPS1Q92902 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HPS1Q92902 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HPS1Q92902 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HPS1Q92902 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.3■□□□□ 0.04
HPS1Q92902 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.3■□□□□ 0.04
HPS1Q92902 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HPS1Q92902 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HPS1Q92902 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.3■□□□□ 0.04
HPS1Q92902 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.3■□□□□ 0.04
HPS1Q92902 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.3■□□□□ 0.04
HPS1Q92902 IFNL4P1-201ENST00000607083 540 ntBASIC15.3■□□□□ 0.04
HPS1Q92902 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS1Q92902 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
HPS1Q92902 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HPS1Q92902 AC099343.3-201ENST00000605834 2503 ntBASIC15.3■□□□□ 0.04
HPS1Q92902 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS1Q92902 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS1Q92902 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
HPS1Q92902 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HPS1Q92902 AC078925.2-201ENST00000624013 1973 ntBASIC15.29■□□□□ 0.04
HPS1Q92902 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS1Q92902 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS1Q92902 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HPS1Q92902 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS1Q92902 AL353692.3-201ENST00000407031 1396 ntBASIC15.29■□□□□ 0.04
HPS1Q92902 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS1Q92902 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS1Q92902 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.29■□□□□ 0.04
HPS1Q92902 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HPS1Q92902 FDX1P1-201ENST00000449115 551 ntBASIC15.29■□□□□ 0.04
HPS1Q92902 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.29■□□□□ 0.04
HPS1Q92902 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.29■□□□□ 0.04
HPS1Q92902 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HPS1Q92902 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.29■□□□□ 0.04
HPS1Q92902 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS1Q92902 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS1Q92902 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HPS1Q92902 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HPS1Q92902 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms