Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AL603756.1-201ENST00000606511 2163 ntBASIC20.31■□□□□ 0.84
RTL9Q8NET4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL9Q8NET4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.31■□□□□ 0.84
RTL9Q8NET4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RTL9Q8NET4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.31■□□□□ 0.84
RTL9Q8NET4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL9Q8NET4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL9Q8NET4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RTL9Q8NET4 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RTL9Q8NET4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RTL9Q8NET4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL9Q8NET4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL9Q8NET4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL9Q8NET4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC20.31■□□□□ 0.84
RTL9Q8NET4 NME2P1-201ENST00000426182 414 ntBASIC20.31■□□□□ 0.84
RTL9Q8NET4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC20.31■□□□□ 0.84
RTL9Q8NET4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.31■□□□□ 0.84
RTL9Q8NET4 CR383656.12-201ENST00000549567 513 ntBASIC20.31■□□□□ 0.84
RTL9Q8NET4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.31■□□□□ 0.84
RTL9Q8NET4 AC024267.1-201ENST00000582320 895 ntBASIC20.31■□□□□ 0.84
RTL9Q8NET4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.31■□□□□ 0.84
RTL9Q8NET4 AL589739.1-201ENST00000607720 493 ntBASIC20.31■□□□□ 0.84
RTL9Q8NET4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTL9Q8NET4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL9Q8NET4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL9Q8NET4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RTL9Q8NET4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.3■□□□□ 0.84
RTL9Q8NET4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RTL9Q8NET4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RTL9Q8NET4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RTL9Q8NET4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.3■□□□□ 0.84
RTL9Q8NET4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTL9Q8NET4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTL9Q8NET4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL9Q8NET4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL9Q8NET4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL9Q8NET4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC20.3■□□□□ 0.84
RTL9Q8NET4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTL9Q8NET4 MTND6P24-201ENST00000440466 518 ntBASIC20.3■□□□□ 0.84
RTL9Q8NET4 RN7SL692P-201ENST00000464677 288 ntBASIC20.3■□□□□ 0.84
RTL9Q8NET4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC20.3■□□□□ 0.84
RTL9Q8NET4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.3■□□□□ 0.84
RTL9Q8NET4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RTL9Q8NET4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RTL9Q8NET4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.3■□□□□ 0.84
RTL9Q8NET4 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL9Q8NET4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL9Q8NET4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL9Q8NET4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL9Q8NET4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL9Q8NET4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RTL9Q8NET4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RTL9Q8NET4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTL9Q8NET4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RTL9Q8NET4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RTL9Q8NET4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.29■□□□□ 0.84
RTL9Q8NET4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.29■□□□□ 0.84
RTL9Q8NET4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTL9Q8NET4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTL9Q8NET4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTL9Q8NET4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RTL9Q8NET4 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RTL9Q8NET4 AC008738.7-201ENST00000609744 511 ntBASIC20.29■□□□□ 0.84
RTL9Q8NET4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTL9Q8NET4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTL9Q8NET4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTL9Q8NET4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTL9Q8NET4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.29■□□□□ 0.84
RTL9Q8NET4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RTL9Q8NET4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.29■□□□□ 0.84
RTL9Q8NET4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTL9Q8NET4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RTL9Q8NET4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RTL9Q8NET4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RTL9Q8NET4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.29■□□□□ 0.84
RTL9Q8NET4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTL9Q8NET4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC20.28■□□□□ 0.84
RTL9Q8NET4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTL9Q8NET4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.28■□□□□ 0.84
RTL9Q8NET4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTL9Q8NET4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RTL9Q8NET4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTL9Q8NET4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTL9Q8NET4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTL9Q8NET4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTL9Q8NET4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTL9Q8NET4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTL9Q8NET4 OR8S1-201ENST00000310194 1080 ntBASIC20.28■□□□□ 0.84
RTL9Q8NET4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RTL9Q8NET4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC20.28■□□□□ 0.84
RTL9Q8NET4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.28■□□□□ 0.84
RTL9Q8NET4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.28■□□□□ 0.84
RTL9Q8NET4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RTL9Q8NET4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.28■□□□□ 0.84
RTL9Q8NET4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC20.28■□□□□ 0.84
RTL9Q8NET4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.28■□□□□ 0.84
RTL9Q8NET4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC20.28■□□□□ 0.84
RTL9Q8NET4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.28■□□□□ 0.84
RTL9Q8NET4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
RTL9Q8NET4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms