Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ATPAF2Q8N5M1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 MIR574-201ENST00000385209 96 ntBASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 POLD2P1-201ENST00000511220 997 ntBASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ATPAF2Q8N5M1 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 AC140658.5-201ENST00000438532 169 ntBASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 AC074386.1-202ENST00000463561 864 ntBASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 AC109635.5-201ENST00000533593 962 ntBASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 AL009183.1-201ENST00000603760 355 ntBASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 AC092865.6-201ENST00000642101 219 ntBASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
ATPAF2Q8N5M1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATPAF2Q8N5M1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ATPAF2Q8N5M1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
ATPAF2Q8N5M1 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATPAF2Q8N5M1 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ATPAF2Q8N5M1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATPAF2Q8N5M1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATPAF2Q8N5M1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATPAF2Q8N5M1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATPAF2Q8N5M1 FER1L4-210ENST00000615531 5998 ntBASIC17.01■□□□□ 0.31
ATPAF2Q8N5M1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATPAF2Q8N5M1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATPAF2Q8N5M1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.01■□□□□ 0.31
ATPAF2Q8N5M1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.01■□□□□ 0.31
ATPAF2Q8N5M1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ATPAF2Q8N5M1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATPAF2Q8N5M1 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATPAF2Q8N5M1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATPAF2Q8N5M1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
ATPAF2Q8N5M1 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ATPAF2Q8N5M1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.01■□□□□ 0.31
ATPAF2Q8N5M1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATPAF2Q8N5M1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.01■□□□□ 0.31
ATPAF2Q8N5M1 AC092919.2-201ENST00000623631 1645 ntBASIC17.01■□□□□ 0.31
ATPAF2Q8N5M1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATPAF2Q8N5M1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATPAF2Q8N5M1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ATPAF2Q8N5M1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms