Protein–RNA interactions for Protein: Q8IWD4

CCDC117, Coiled-coil domain-containing protein 117, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117Q8IWD4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC117Q8IWD4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 AC092919.2-201ENST00000623631 1645 ntBASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 AC068587.6-202ENST00000641839 5619 ntBASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 DNAJB3-202ENST00000449667 1266 ntBASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 DUX4L17-201ENST00000557360 1267 ntBASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC117Q8IWD4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 PMS2P4-201ENST00000412466 1052 ntBASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 AL671277.1-201ENST00000429656 993 ntBASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 AP001160.2-201ENST00000596071 487 ntBASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 AL031055.1-201ENST00000606362 631 ntBASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 AC092902.6-201ENST00000641783 218 ntBASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 AC106820.2-201ENST00000563775 3264 ntBASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC117Q8IWD4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 CNN2P11-201ENST00000429351 262 ntBASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC117Q8IWD4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms