Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF550Q7Z398 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF550Q7Z398 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.33■□□□□ 0.04
ZNF550Q7Z398 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ZNF550Q7Z398 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 AL512652.2-201ENST00000625156 1716 ntBASIC15.32■□□□□ 0.04
ZNF550Q7Z398 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 MIR1233-2-201ENST00000408138 82 ntBASIC15.32■□□□□ 0.04
ZNF550Q7Z398 MIR1233-1-201ENST00000408722 82 ntBASIC15.32■□□□□ 0.04
ZNF550Q7Z398 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.32■□□□□ 0.04
ZNF550Q7Z398 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 AC010654.1-201ENST00000615722 808 ntBASIC15.32■□□□□ 0.04
ZNF550Q7Z398 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 ALOX12P2-203ENST00000570921 1945 ntBASIC15.32■□□□□ 0.04
ZNF550Q7Z398 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 AL671710.1-201ENST00000610245 2349 ntBASIC15.32■□□□□ 0.04
ZNF550Q7Z398 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
ZNF550Q7Z398 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 KRT18P3-201ENST00000451602 1288 ntBASIC15.31■□□□□ 0.04
ZNF550Q7Z398 AC108073.2-201ENST00000464002 357 ntBASIC15.31■□□□□ 0.04
ZNF550Q7Z398 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.31■□□□□ 0.04
ZNF550Q7Z398 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 FAM197Y3-203ENST00000618346 717 ntBASIC15.31■□□□□ 0.04
ZNF550Q7Z398 AC004790.2-201ENST00000623588 572 ntBASIC15.31■□□□□ 0.04
ZNF550Q7Z398 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF550Q7Z398 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms