Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
HIST2H3AQ71DI3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST2H3AQ71DI3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST2H3AQ71DI3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST2H3AQ71DI3 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST2H3AQ71DI3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HIST2H3AQ71DI3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HIST2H3AQ71DI3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
HIST2H3AQ71DI3 ALOX12P2-203ENST00000570921 1945 ntBASIC14.64□□□□□ -0.07
HIST2H3AQ71DI3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
HIST2H3AQ71DI3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST2H3AQ71DI3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST2H3AQ71DI3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.64□□□□□ -0.07
HIST2H3AQ71DI3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HIST2H3AQ71DI3 AL031731.1-201ENST00000642131 2094 ntBASIC14.64□□□□□ -0.07
HIST2H3AQ71DI3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
HIST2H3AQ71DI3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HIST2H3AQ71DI3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.64□□□□□ -0.07
HIST2H3AQ71DI3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 AC108751.1-201ENST00000490852 363 ntBASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 IGHV3-22-201ENST00000520721 359 ntBASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 AP001005.1-201ENST00000571755 1248 ntBASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 CYP2T1P-202ENST00000641596 2535 ntBASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HIST2H3AQ71DI3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 TPM4P1-201ENST00000436100 807 ntBASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 AC009947.1-201ENST00000444350 727 ntBASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 UNC93B6-202ENST00000528242 690 ntBASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HIST2H3AQ71DI3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms