Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 HCG4B-203ENST00000450128 991 ntBASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 KRT8P39-201ENST00000396270 1433 ntBASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NHLRC1Q6VVB1 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 AC093909.1-201ENST00000504731 1122 ntBASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 CYP2A7P1-201ENST00000595391 815 ntBASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NHLRC1Q6VVB1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NHLRC1Q6VVB1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
NHLRC1Q6VVB1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
NHLRC1Q6VVB1 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
NHLRC1Q6VVB1 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
NHLRC1Q6VVB1 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.02
NHLRC1Q6VVB1 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
NHLRC1Q6VVB1 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 RHOQP3-201ENST00000437982 621 ntBASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 AC079776.4-201ENST00000511039 504 ntBASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.95□□□□□ -0.02
NHLRC1Q6VVB1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms