Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LPCAT4Q643R3 AC005089.1-201ENST00000619486 2241 ntBASIC15.71■□□□□ 0.11
LPCAT4Q643R3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
LPCAT4Q643R3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.71■□□□□ 0.11
LPCAT4Q643R3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LPCAT4Q643R3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LPCAT4Q643R3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LPCAT4Q643R3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LPCAT4Q643R3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.71■□□□□ 0.11
LPCAT4Q643R3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.71■□□□□ 0.11
LPCAT4Q643R3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LPCAT4Q643R3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
LPCAT4Q643R3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.71■□□□□ 0.11
LPCAT4Q643R3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.71■□□□□ 0.11
LPCAT4Q643R3 AC079602.3-201ENST00000623931 403 ntBASIC15.71■□□□□ 0.11
LPCAT4Q643R3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LPCAT4Q643R3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LPCAT4Q643R3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
LPCAT4Q643R3 AL391807.1-203ENST00000604392 2365 ntBASIC15.71■□□□□ 0.11
LPCAT4Q643R3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LPCAT4Q643R3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LPCAT4Q643R3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
LPCAT4Q643R3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
LPCAT4Q643R3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
LPCAT4Q643R3 AC069224.1-201ENST00000566372 1715 ntBASIC15.71■□□□□ 0.1
LPCAT4Q643R3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
LPCAT4Q643R3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.71■□□□□ 0.1
LPCAT4Q643R3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.71■□□□□ 0.1
LPCAT4Q643R3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
LPCAT4Q643R3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.1
LPCAT4Q643R3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LPCAT4Q643R3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 AC098590.1-201ENST00000468126 897 ntBASIC15.7■□□□□ 0.1
LPCAT4Q643R3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 AL512604.3-201ENST00000569583 964 ntBASIC15.7■□□□□ 0.1
LPCAT4Q643R3 AC233702.5-201ENST00000584107 538 ntBASIC15.7■□□□□ 0.1
LPCAT4Q643R3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 AL049637.2-201ENST00000641778 930 ntBASIC15.7■□□□□ 0.1
LPCAT4Q643R3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LPCAT4Q643R3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 FITM1-202ENST00000559294 800 ntBASIC15.69■□□□□ 0.1
LPCAT4Q643R3 C2orf69P3-201ENST00000565542 1120 ntBASIC15.69■□□□□ 0.1
LPCAT4Q643R3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LPCAT4Q643R3 AL021920.2-201ENST00000624828 1351 ntBASIC15.69■□□□□ 0.1
LPCAT4Q643R3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms