Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP1Q04837 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.1□□□□□ -0.15
SSBP1Q04837 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.1□□□□□ -0.15
SSBP1Q04837 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SSBP1Q04837 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP1Q04837 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP1Q04837 AC243591.1-201ENST00000452967 1364 ntBASIC14.09□□□□□ -0.15
SSBP1Q04837 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.09□□□□□ -0.15
SSBP1Q04837 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SSBP1Q04837 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP1Q04837 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.09□□□□□ -0.15
SSBP1Q04837 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.09□□□□□ -0.15
SSBP1Q04837 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SSBP1Q04837 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP1Q04837 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.09□□□□□ -0.15
SSBP1Q04837 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP1Q04837 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP1Q04837 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SSBP1Q04837 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.09□□□□□ -0.15
SSBP1Q04837 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP1Q04837 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP1Q04837 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP1Q04837 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.09□□□□□ -0.15
SSBP1Q04837 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.09□□□□□ -0.15
SSBP1Q04837 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.09□□□□□ -0.15
SSBP1Q04837 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.09□□□□□ -0.15
SSBP1Q04837 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SSBP1Q04837 AC010654.1-201ENST00000615722 808 ntBASIC14.09□□□□□ -0.15
SSBP1Q04837 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.09□□□□□ -0.15
SSBP1Q04837 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP1Q04837 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP1Q04837 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP1Q04837 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP1Q04837 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP1Q04837 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.09□□□□□ -0.15
SSBP1Q04837 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SSBP1Q04837 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP1Q04837 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.09□□□□□ -0.15
SSBP1Q04837 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP1Q04837 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP1Q04837 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.09□□□□□ -0.15
SSBP1Q04837 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP1Q04837 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SSBP1Q04837 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SSBP1Q04837 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SSBP1Q04837 SSR4P1-203ENST00000599569 2260 ntBASIC14.08□□□□□ -0.15
SSBP1Q04837 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SSBP1Q04837 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.08□□□□□ -0.16
SSBP1Q04837 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.08□□□□□ -0.16
SSBP1Q04837 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP1Q04837 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SSBP1Q04837 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP1Q04837 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.08□□□□□ -0.16
SSBP1Q04837 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP1Q04837 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
SSBP1Q04837 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.08□□□□□ -0.16
SSBP1Q04837 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
SSBP1Q04837 MIR4492-201ENST00000581627 80 ntBASIC14.08□□□□□ -0.16
SSBP1Q04837 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.08□□□□□ -0.16
SSBP1Q04837 AL592071.1-201ENST00000611956 408 ntBASIC14.08□□□□□ -0.16
SSBP1Q04837 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP1Q04837 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.08□□□□□ -0.16
SSBP1Q04837 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SSBP1Q04837 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.08□□□□□ -0.16
SSBP1Q04837 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP1Q04837 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.08□□□□□ -0.16
SSBP1Q04837 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.08□□□□□ -0.16
SSBP1Q04837 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SSBP1Q04837 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP1Q04837 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP1Q04837 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.08□□□□□ -0.16
SSBP1Q04837 PMPCAP1-201ENST00000508114 1576 ntBASIC14.08□□□□□ -0.16
SSBP1Q04837 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP1Q04837 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.08□□□□□ -0.16
SSBP1Q04837 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP1Q04837 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP1Q04837 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP1Q04837 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.08□□□□□ -0.16
SSBP1Q04837 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP1Q04837 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
SSBP1Q04837 AC092919.2-201ENST00000623631 1645 ntBASIC14.08□□□□□ -0.16
SSBP1Q04837 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.07□□□□□ -0.16
SSBP1Q04837 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.07□□□□□ -0.16
SSBP1Q04837 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.07□□□□□ -0.16
SSBP1Q04837 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SSBP1Q04837 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SSBP1Q04837 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SSBP1Q04837 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms